Paenibacillus polymyxa Sb3-1: RE92_10985
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Entry
RE92_10985 CDS
T03812
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Pathway
ppoy03030
DNA replication
ppoy03430
Mismatch repair
ppoy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RE92_10985
03430 Mismatch repair
RE92_10985
03440 Homologous recombination
RE92_10985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppoy03032
]
RE92_10985
03400 DNA repair and recombination proteins [BR:
ppoy03400
]
RE92_10985
Enzymes [BR:
ppoy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RE92_10985
DNA replication proteins [BR:
ppoy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RE92_10985
DNA repair and recombination proteins [BR:
ppoy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RE92_10985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
RuvB_N
DnaX_C
AAA_30
TIP49
AAA_16
AAA_5
AAA_22
AAA_19
RCF1-5-like_lid
AAA_7
AAA_14
AAA_2
Rad17
nSTAND3
PIF1
AAA_assoc_2
End3
AAA_28
Mg_chelatase
RNA_helicase
AAA_6
DUF815
AAA_18
TsaE
Motif
Other DBs
NCBI-ProteinID:
AJE51517
LinkDB
All DBs
Position
complement(2488559..2490310)
Genome browser
AA seq
583 aa
AA seq
DB search
MEHIALYRAWRPQAFKDMVGQQHIIQTLQNAIRENRTSHAYLFSGPRGTGKTSAAKILAK
AINCEHGPAPEPCNECEACKRITAGAVMDVQEIDAASNRGVEEIRDLRDKVKYAPTEVRH
KVYIIDEVHMLTTEAFNALLKTLEEPPPHVMFILATTEPHRIPATIISRCQRFDFRRVSL
EEQTERLDLICQQENIQADLDALQYIARLSDGGMRDAVSVLDQISSFTDGRVTYQQVLDM
TGGIASEQFGKLALALLKEDVGTVLQLIENFMQEGKSADKCMENLLYYFRDLLMIKMVPQ
ATKMTERVLNPEQFKEVADAFTKEQLFAMIDTLNRYQGEMKYAVQPQTLFEVALLKLCSI
PGEAGTAAQPTVQRSGAAAGQEEVAMLKRQLAELEKKLERAMQGGLAVGAGQETPSGGRQ
ASGGRAPAPRLSAPAKLPSQLDRYIAEKSSEAFAAVGRKWSQILQAVKEAKVTVHAWFMD
GEPVSVLEDSVLVAFKNNIHRETTEKPANKQVIEKVLHEQLGHPYRLVTMMQKDWNAAIE
GVSDQPAEELQLEPEHDAPGKSKEPWIDEAIQLFGEDLVVIKE
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
ttggaacatatagcgttgtaccgtgcttggcggccgcaggctttcaaggacatggtagga
caacagcatattatccagacattgcagaatgccatccgtgaaaatcgcacgtcccatgcc
tacctgttcagtggtccgcgaggaacgggtaagaccagtgcggccaaaattttggccaag
gcaatcaactgtgagcatggacctgcgccggaaccttgcaacgaatgcgaagcctgtaaa
cggatcacggccggagcggtcatggatgtacaggagattgacgcagcctccaaccggggc
gttgaagagattcgtgatttgcgcgataaagtcaaatatgcgcccacagaagtgcggcac
aaggtttatatcattgatgaagtgcacatgctgacgacggaagcgttcaatgcgctgctc
aagacgctggaagagccgccgccacacgtaatgtttatattggctacgacagagccgcat
cggattcccgcgacaattatttcgcgttgccagcgttttgacttccggcgagtatcgctg
gaggagcagacagagcggcttgacctgatatgccaacaggagaacatccaagctgatttg
gatgcactgcaatatattgcacgtctttcagatggcgggatgcgagatgcggttagtgtt
ttggatcagatatcctcgtttactgatggccgggttacgtatcagcaggtgctggatatg
acgggcgggatcgcatccgagcaattcggtaaattggccttggcattactgaaagaagat
gtgggcacagtgctccaattgatcgagaactttatgcaggaaggtaaaagtgcggataag
tgtatggagaatcttctgtactatttccgagatctgctaatgatcaaaatggtgccgcag
gcgaccaaaatgacggagcgagtgctgaatccggagcagtttaaggaagtggcagatgct
tttaccaaggagcagctctttgcaatgatcgacacccttaatcgttatcagggcgagatg
aaatatgcggttcagccccaaactttatttgaggtagctctattgaagttatgcagcatt
ccgggggaagcgggaactgctgctcagccgactgtacagcgctctggtgctgctgctggt
caggaagaagtggccatgttaaagcgccagcttgctgagctggaaaagaagctggaacgt
gcaatgcaaggtggcttggctgttggggcgggtcaggagacaccgtcaggcggccgtcag
gcttctggtggtcgtgcccctgctccacgtctttcagcgccggccaaactcccttctcag
ttggatcgctatattgctgagaagtcaagcgaagcattcgcagcggtggggcgtaagtgg
agccagattttgcaagcggtaaaagaggcgaaagttacggttcatgcttggtttatggat
ggtgagccggtttctgtgttagaggacagtgtactggtcgcgtttaagaacaacattcat
cgtgaaactaccgaaaaacctgccaataagcaggtcatcgagaaggttttacatgagcag
ttggggcatccttatcgtttggtaacgatgatgcaaaaggattggaatgctgcgattgaa
ggagtttctgaccaacctgccgaagaattgcaactggagccggagcatgatgcgccggga
aagtccaaggagccctggattgatgaagcgattcagcttttcggggaagatctggtagtc
attaaagaataa
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