Paenibacillus polymyxa Sb3-1: RE92_11035
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Entry
RE92_11035 CDS
T03812
Name
(GenBank) beta-lactamase
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
RE92_11035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppoy03021
]
RE92_11035
03019 Messenger RNA biogenesis [BR:
ppoy03019
]
RE92_11035
Transcription machinery [BR:
ppoy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
RE92_11035
Messenger RNA biogenesis [BR:
ppoy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
RE92_11035
U7-dependent histone pre-mRNA processing factors
RE92_11035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B
Lactamase_B_2
Lactamase_B_6
Lactamase_B_3
Anti-Pycsar_Apyc1
Gp49
Motif
Other DBs
NCBI-ProteinID:
AJE51527
LinkDB
All DBs
Position
complement(2501466..2502851)
Genome browser
AA seq
461 aa
AA seq
DB search
MMMTKLRIWGGAGEHGRSCYVFEGKQHRIMLDCGVKKEGIGQYPIFPPQKVKELTTVLLS
HAHEDHSMALPLLYKYGYQGEVWTTKATAEQLGSYFRSWQTYVESRGGELPYSEQDIQSI
TYRYLEDEAPSGVWCEACPGVRMMWGRSGHLAGAVWYIIEMEGKRLFFSGDYSRESELLA
ADAPDLRMGEGIDDLPECKPQSYLVDISIMDNAYGMDIDPQPVKLERLRVEMEQILRSGG
HVLLPVPAFGRGQELIVWASEQFPEQAIIVEPDLWHGLKQLNRWREWLRPGAFTRIKHVL
NSDRVFVPRDAAERISLLERNTATIIATRDGMMDSPQARWYYQYLSDNRHMLNDMDSGEN
IRNSVILTGHASNGSFGKHLLERADSNDICIARHLTYKVHQGLSDVRQMLKDLPSKQAVL
VHAPKPQTDLVRDVLIREENNAHGGLAREVHSVEPGSTIEV
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgaccaagcttaggatttggggcggagcgggcgaacatggccgctcctgttat
gtttttgaaggaaagcagcatcgtatcatgctggattgtggcgtaaaaaaggaaggaatc
gggcaatatccgatttttccgccacagaaggtgaaggagctaactactgttttgctgtct
catgcacatgaggatcattccatggcgctccccttactgtacaagtacggataccaggga
gaggtttggacgaccaaagccaccgctgagcagctgggctcctattttcgctcctggcag
acttatgttgaatcgagaggtggtgaattgccttacagtgaacaggatatccaatccatt
acctatcgctatctagaagatgaagcgccttcaggagtgtggtgtgaagcttgtccgggt
gtgagaatgatgtggggacgcagtggacatttggctggtgcagtgtggtatatcatagaa
atggaagggaagcggttgttcttttctggagactatagccgtgagtctgagctgcttgct
gccgatgcaccggacttgcgtatgggggaggggatagatgaccttcctgaatgcaagcca
cagtcctatctagtggacatatctatcatggacaatgcctatggcatggatatagacccg
cagcctgttaagctggagcggctgagggtcgagatggagcagatattacggtctggcggt
catgtgttgttgccagtgcctgcctttggcagaggacaggagttgatcgtatgggccagt
gagcaattccctgaacaagcaataattgtagagcctgacctgtggcacggattgaaacag
ttaaatcgctggagagagtggctacggccgggagctttcacgcgaataaaacatgtgtta
aacagtgacagggtgttcgtgcctcgtgatgctgcggaacgaataagtctgctagaacgg
aacacggccactattattgcaacaagggacggcatgatggattccccgcaggcacgttgg
tattatcaatatctgtcggataaccgccatatgctgaatgatatggacagcggagaaaac
attaggaacagtgtgatattgaccggtcatgcttccaatggttcttttggaaagcatctg
ttggaacgtgcggactccaatgacatctgtatagctcggcatttgacttacaaggtgcat
cagggattatcggatgtaaggcaaatgttgaaggatctgcctagcaaacaggctgtactc
gttcatgcaccaaaaccgcagaccgaccttgtacgagatgtgttgataagagaagaaaat
aatgcacatggaggtcttgccagagaagttcattctgtggagccaggttcaacgatagag
gtttag
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