Paenibacillus polymyxa Sb3-1: RE92_11100
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Entry
RE92_11100 CDS
T03812
Name
(GenBank) carboxypeptidase
KO
K21464
penicillin-binding protein 2D [EC:
2.4.99.28
3.4.16.4
]
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Pathway
ppoy00550
Peptidoglycan biosynthesis
ppoy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RE92_11100
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ppoy01003
]
RE92_11100
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppoy01011
]
RE92_11100
Enzymes [BR:
ppoy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
RE92_11100
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RE92_11100
Glycosyltransferases [BR:
ppoy01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
RE92_11100
Peptidoglycan biosynthesis and degradation proteins [BR:
ppoy01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
RE92_11100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AJE51540
LinkDB
All DBs
Position
2518391..2520448
Genome browser
AA seq
685 aa
AA seq
DB search
MTDTTGRSSKRKPLWLRCFQGLMSLTILTVIAACILLAYLYTTSLPLADTDRNSRLLDSQ
GQVIATFSAGGKESIPVQLDHISPDLIAATLAVEDRKFYDHFGFDFKGLGRAVIVNLTRW
DMSQGASTLTQQLARNLYLSHEKTWTRKAKEAIYTAQLEMKYSKDELLQMYLNEIYYGHG
AYGIEAASQMYFGKSAKDLDLAESALLAGIPKGPTYYSPYNHMKNAKDRQKIVLDSMALI
GKITPAEASKAYEEILALRPESQRRTVEAAPWFRDYVRQLATHQFGISEAVLEHGGLSIY
TTLDMHMQQAAEAAVNEGMKNSNGLETALISMDPRNGHVKAMIGGTNYVGNQYNHALATT
RQPGSSFKPIMYLSALDSGQLTSTSKFESRPTLFHYDNNRKTYKPKNFGDKYLGEIDLRR
AIAASDNIYAVSTILQVGADKVMDLASKMGITSELKPVPSLALGVSPVSPFEMASAFSVI
SSGGQKVAPVAVLRITDAAGRSLYEAPQAAPVQVVKPASAYVLTRLMEGVFEEGGTGNRV
AKLIKRPVAGKSGTTNTDAWMVGFTPELSTAVWVGYDKGKAISTQDARRAAPIFAQYTEK
ALENVPPKIFPIPDGVVSAYIDPASGKLAAPDSPDKRLEVFVSGTEPKETLSGQNNPQAS
TPTDQAERQAEKKSWWGNFKRWWME
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatactaccgggcgatcctccaagcgtaaaccgctttggcttcgatgctttcaa
ggcctgatgtctctcacgattctgacggtcatcgccgcctgcattctgctcgcctatttg
tacacaaccagccttccgctcgccgatacagaccggaattcacgtctgctcgatagtcag
gggcaagtcattgctaccttctctgccggaggaaaggaatctattcctgtccagcttgat
cacatttcgcccgatttaatagcagctacactggctgtggaagaccggaagttttacgat
cattttggctttgatttcaaaggtctgggccgggcagtaatcgttaatttgacccgatgg
gatatgtcgcaaggggccagcacactgactcagcagcttgcgcgcaatctgtacttatct
cacgagaaaacgtggacgcgcaaggccaaggaagccatctatactgcacagcttgaaatg
aagtattccaaggatgagctgctgcaaatgtatttaaatgaaatttactatggtcatggc
gcctatggcattgaggcggcctcgcagatgtatttcggtaaatccgcaaaggatctggac
ttggccgaaagcgccctattggcaggtattccgaaaggtccgacctactattcaccatat
aatcatatgaaaaacgcaaaggatcggcagaaaattgtactggactccatggcactcatc
ggtaagattacaccggctgaagccagcaaggcctatgaggaaatactggccctgcggccc
gagagccagcgtcggacagtggaagctgctccctggtttcgcgattatgttcgccagcta
gcgactcatcaatttgggattagcgaagcggtgcttgagcatggcgggctgagcatttat
acgacgctggacatgcacatgcagcaggcagccgaggcggctgtcaatgagggcatgaag
aacagcaacggactggaaactgcactaatctccatggacccgcgcaatggacatgtcaag
gccatgatcggcggaacgaactatgtcgggaatcaatacaaccatgcactggccacaacc
cggcagccaggctcgtctttcaagccgattatgtatctcagcgcgctggattccggccaa
ttgacgagtacgtccaaattcgaaagccgaccgacgttgttccactacgacaacaaccgc
aaaacttataagcccaaaaattttggagataaatatttgggtgaaatagatctgcggcgc
gccattgcggcatctgataatatttatgccgtcagcaccattctgcaggtaggagcggat
aaggtcatggacctcgccagcaaaatgggcattacgagcgagctcaagcccgtgccttcg
ctggcgttgggcgtgtcgcccgtcagcccgtttgagatggcctcggccttctcggtcatc
agcagtggcgggcaaaaggtagctccggtggcggtgctgcgcatcaccgatgcggccgga
cgatcactgtacgaagcgccgcaagccgcacccgtgcaggtggtaaagcccgcctctgcc
tatgtcctcacacgcctcatggaaggcgtgttcgaagaaggcggcaccggcaatcgggtc
gcgaagttgatcaagcgcccggttgccggcaaaagcggcacgaccaatacggacgcgtgg
atggtcggcttcaccccggagctatccaccgctgtttgggtcggatatgacaagggcaag
gccatcagcacgcaggatgcccgacgggcagcaccaattttcgcacaatatacggaaaaa
gcgctggagaatgtgccgcccaaaatattcccgatccctgacggcgtagtcagcgcctat
attgatccggctagcggcaagctggctgcgccggacagtcccgacaagcggctggaggta
ttcgttagcggtaccgagccgaaagagaccctatcggggcagaataacccacaggcatcg
acacctactgaccaagcggaacgacaggccgaaaaaaaatcctggtggggcaattttaag
cgatggtggatggagtaa
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