Paenibacillus polymyxa Sb3-1: RE92_14035
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Entry
RE92_14035 CDS
T03812
Name
(GenBank) stage II sporulation protein D
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppoy01011
]
RE92_14035
Enzymes [BR:
ppoy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RE92_14035
Peptidoglycan biosynthesis and degradation proteins [BR:
ppoy01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RE92_14035
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
DUF4739
Motif
Other DBs
NCBI-ProteinID:
AJE52095
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All DBs
Position
3168956..3170395
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AA seq
479 aa
AA seq
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MKDSQVRIRIPIHHPQEHRQASLAEESSGSIATSLQKNKLMQQHAESTGVFPTIAKTNRR
TTALTSTTHTVGTMLPEAGTSPGNTYDASRRRGPQPHLRPAAGRAPRWGSRRPWLPFAAM
AGVLVLAMAVPALMAWPRQAAQPLPTGSRTAAPAQSNTTAKSEAPVTRLPGVPPIPAVPA
APARSVPVAAEPDVRVYVTSTGRTETLPLEQYIVGVVAAEMPPSFEEEALKAQAIAARTF
IIRRLLADDTSGAPAGADVTDTVKHQAYISKAKLTREWERSGKSADLAKIRQAVRETKDT
IMVYEGKPITASFFSTSNGYTENSEDVWAKAVPYLRSVSSPWDKQLAPRFTETVTLSRQS
VFDRLGLSRAAVTASTGGGGMPEIRILSKTEGHRIKKIEVGGLVFTGPEIRNKLGLRSAE
FTWKTEGDRIAITTYGYGHGVGMSQWGANGMAKEGHTATQILLHYYTGISFANASRILS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaaagattcacaggttcgcatccgtataccaattcatcatcctcaggaacatcgccag
gcctcacttgcggaggaaagctctggctctatagcaacttcgttgcagaaaaataaactt
atgcagcagcatgcagaatcaacaggtgtatttccgactatcgccaagaccaatcggcgt
accacagcgttgacttccactactcacactgtcggtacgatgcttcctgaggctggaaca
tcgcccggtaacacatacgacgcaagcaggcggcggggaccgcagccgcatctgcgacct
gcagctgggcgagccccgcgttggggcagccgccgcccatggctgccatttgccgccatg
gcaggggtgctggtgcttgccatggctgtgcccgcactcatggcatggcctcgccaggcg
gcgcagcctttgccgactgggagccgcacagccgcacccgcgcagtctaatacgacggca
aagagcgaggcacccgtcacgcgcctgccgggtgtcccgccgataccggctgtacccgct
gctccagcgcgtagcgtgccagtcgcggcagagccggacgtgcgggtgtacgtcacgtct
actggccggacggagacattacctttggagcaatacattgtcggcgtagtagcagctgaa
atgccgcccagctttgaggaagaggcattgaaagcacaggctatcgccgcgcgtacgttc
attatccggcgtttgttggctgatgacaccagcggcgccccggcgggcgcagatgtgaca
gataccgttaaacaccaggcttacatctccaaagctaaacttactagagaatgggagcgt
tctggtaaatccgcagatctggcaaaaattcgccaggctgtgcgcgagaccaaggataca
atcatggtatatgagggtaaacccattacagcttcttttttttctaccagcaacggctat
accgaaaattcagaggatgtatgggcgaaggccgtgccctatttacgaagtgtgtctagt
ccatgggacaagcaactggccccccgttttacagaaaccgtcacactgagccgtcagagc
gtgttcgatagattgggattgagtcgtgctgcggtcactgcttctactggaggtgggggt
atgccagagattcgtatactctccaagacagaaggacaccgcatcaagaagattgaggtg
ggaggcttggtctttacggggccggagattcgtaacaaactagggctacgatcggctgaa
tttacgtggaagaccgaaggggaccggattgctataacaacctatgggtatggccatggc
gtcggtatgagccagtggggagccaatggaatggctaaggaaggtcataccgccactcag
attcttcttcactattatactggtatttcttttgcgaatgcctctcgtattctaagttag
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