KEGG   Paenibacillus polymyxa Sb3-1: RE92_14175
Entry
RE92_14175        CDS       T03812                                 
Name
(GenBank) competence protein ComF
  KO
K02240  competence protein ComFA
Organism
ppoy  Paenibacillus polymyxa Sb3-1
Brite
KEGG Orthology (KO) [BR:ppoy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppoy02044]
    RE92_14175
Secretion system [BR:ppoy02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   RE92_14175
SSDB
Motif
Pfam: Helicase_C DEAD ResIII AAA_30 Flavi_DEAD AAA_22 TPR_10
Other DBs
NCBI-ProteinID: AJE52122
LinkDB
Position
3211052..3213172
AA seq 706 aa
MKIAVYAVRYKGKWNLRLSVDIRVDMTWWLRQVKDQENAVERWVLLGEELPLSWGVSLCG
RFKGLAEMERWGDRQWWAYILSQLKNELVLESSNGERILSGGVENISIWDRQQGWVSRTK
HGNEGRETIGTVRSIQNRKLATGVDGLDMEGLTGQANELTHLLAGRQLLVPEAEALLAEA
APDLEHTWRSAAQLAYLQGRLSFAAGLAPAPRARWSAARRHELRCNRCGSGKVHRTSCAS
CGCKACAYCETCLTLGRSRECSLLLRGTAKPAMPRAAEVAPAANLDRWGLSPAQRAAAEV
ALSFLAAPPRRVRKCSRSEGQWQRARELFRRSMRVRQELGAAAAHGSTLAGYKQSSPKSG
ECAWGIAGRQLPDSAAERFLLWAVTGAGKTEMMFPLLQHVLERGGTALVATPRRDVVLEL
APRLAVAFPQVSMVTLYGGSAERWQRGQLTLATTHQLLRYRQAFDLVVIDEIDAFPYHND
PMLAFAAQAVCKQEGKFIYLSATPPRPLQKEAARGQLPHAKVPVRFHRHPLPVPIRLEAA
PVHHWLQKGQLPASFIQRLYISIQRGAQVFLFVTRISHIQGLVELLIRQLPDIPIAGTSS
QDEERTAKVRLFRVTEIRVLVTTTILERGVTVPRSDVYILDADSSLFDEASLVQMAGRAG
RSKDDPCGSVIFISPQWTSGQKRAIKQIKRMNALARKKGYLKVMKH
NT seq 2121 nt   +upstreamnt  +downstreamnt
atgaaaattgcagtatatgcagttaggtataaagggaaatggaatctccgattatctgtg
gatattcgagtagatatgacatggtggttgcgccaagttaaggaccaggagaatgctgtc
gaaaggtgggtgttattaggagaagagctccccttgtcttggggagtaagcctttgtgga
agatttaagggattagcagaaatggagcggtggggggatcggcaatggtgggcttatatt
ctttcacagctaaagaatgaactggttcttgagtcttctaatggagaacgaatcttatct
ggaggagtagaaaatataagcatttgggaccgtcaacaagggtgggtttctcgcactaaa
catgggaatgagggacgggaaacaataggaactgtacgttctattcaaaacaggaagctc
gctacgggagtagatggattggatatggaaggtttaacaggacaagcgaacgagctgact
catttgttggcaggacgccagttgctcgtacctgaagctgaagcactgctagcagaggca
gccccggatttggagcatacttggcgttcagctgcgcaacttgcatatctgcaaggccga
ctcagctttgctgctggtctcgctccagcaccacgcgcgcgctggtctgccgcgcgtaga
catgaactccgctgcaaccgttgtggcagtggaaaggtgcaccgcacaagctgcgcgtcg
tgcggctgtaaggcgtgcgcctactgcgagacgtgtctcacgcttgggcgcagccgtgag
tgctcgctactgctgcgcggtacagcgaaacctgccatgccgcgcgcggcagaggtagcg
ccggcggcgaatctcgaccgctgggggctgagtcctgcacaacgtgctgccgccgaagta
gcgctgagttttttggccgcaccaccccgcagggtgcgaaaatgctcccgctcggaaggc
caatggcaacgagcgcgcgaattattccggcgcagcatgcgtgtgcgccaggaattaggt
gctgccgctgcgcatggcagcactcttgccggctacaagcagtcctcgcccaaatctggc
gagtgtgcttgggggattgctggccggcaattacctgattctgcggccgaacgttttctg
ctctgggccgtgactggcgcaggcaagacggaaatgatgtttccgcttttacagcatgtg
ttggagcgcggagggacagcgcttgtagcaacaccacgccgagatgtggtattggagttg
gcacctcgattggcagttgcctttcctcaagttagtatggtgacactttatggagggagt
gcagaacggtggcaaaggggacaactgacactagcaacaacacatcagctgttgcgttat
cgccaggcctttgatttggttgtaattgacgagattgatgcatttccttatcacaatgat
ccaatgcttgcctttgctgcccaagcagtatgtaagcaggaagggaaatttatttatttg
tctgcgacgccaccgcgtcctttgcagaaagaggctgcacgtggtcaactgccacatgcc
aaggttcccgttcgttttcatcgtcatcccctacctgtcccaattcgtttggaagctgct
ccagtgcatcattggctgcaaaaaggccagcttcctgcttcatttattcagcgcctatac
atatccattcaacgaggggcacaggtctttctgtttgtgacacgaatctcacatattcaa
ggtcttgtggaattgctgattagacaattgcctgatatacctattgccggcacttcatcg
caggatgaagaacgaaccgctaaggtgcgtttgtttcgagttactgaaatacgtgtgctg
gtcacaaccactattttggagcggggtgtgactgttccacgaagtgatgtgtatatacta
gacgcggacagcagtctttttgatgaagcatcccttgtccaaatggctggtcgcgcggga
agatctaaggatgatccatgtggtagtgttatttttatatcccctcaatggactagcggt
caaaagagagcgattaagcagattaaacgcatgaatgcactggctcggaaaaaaggatat
ctgaaagtgatgaagcactaa

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