KEGG   Paenibacillus polymyxa Sb3-1: RE92_14465
Entry
RE92_14465        CDS       T03812                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
ppoy  Paenibacillus polymyxa Sb3-1
Pathway
ppoy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ppoy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    RE92_14465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppoy03400]
    RE92_14465
DNA repair and recombination proteins [BR:ppoy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RE92_14465
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      RE92_14465
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_19 UvrD-helicase LSDAT_prok AAA_7 HEM4 AAA_22 Kinesin nSTAND_NTPase5 AAA_5 AAA_16 fvmX5
Other DBs
NCBI-ProteinID: AJE52177
UniProt: A0A0F0G5X1
LinkDB
Position
3278974..3280965
AA seq 663 aa
MSDIVVSDKTFEIQSEFQPQGDQPQAIFELVEGIAEGKKHQTLLGATGTGKTYTIAQTIA
KLNRPTLVIAHNKTLAAQLASEFKEFFPNNSVDYFVSYYDYYQPEAYIPSSDTYIEKDSS
INEEIDKLRHSATSSLFERRDVIIVASVSCIYGLGSPKEYSSLLLSLRVGMEKPRNQILS
RLVDIQYQRNDINFVRGTFRVRGDVVEIFPASHGENAIRVELFGDEIERITEINVLTGEL
IGEREHIAIFPASHFVTHEDTMRVALVNIERELEERLAELKEQGKLLEAQRLEQRTRYDI
EMMREVGFCSGVENYSGPLTFRERGATPYTLLDYFPDDMLIVIDESHVTLPQIRAMYNGD
QARKNVLVEHGFRLPSALDNRPLKFEEFEDKVNQIIYVSATPGPYEMEKCDTMVQQIIRP
TGLLDPIIEVRPSKGQIDDLINEIRQRIEREERVLVTTLTKKMAEDLTDYLKEVGIKVRY
MHSEIKTLERMAILRDLRLGTFDVLIGINLLREGLDLPEVSLVAILDADKEGFLRSERSL
IQTIGRAARNSDGRVIMYGDKITDSMDKAIKETERRRAIQIQYNEEHGITPQTIRKKIRD
VIEATKTAESKNDYLPNETGKLSKKERQSLIQRLEAEMKDAAKNLQFERAAELRDALLEL
RAD
NT seq 1992 nt   +upstreamnt  +downstreamnt
atgagtgatatcgttgttagcgataagacttttgaaattcagtcggaattccaacctcaa
ggcgatcaaccccaggccatttttgaattggtagaaggaattgcagaaggaaagaagcat
caaactctgttgggtgctacgggaacaggtaagacgtataccatcgctcaaaccattgcc
aagctgaatcggcctacactggttattgcgcataacaagaccttggctgctcaactggca
agtgagtttaaagaatttttcccaaacaactcagttgattattttgtcagctactatgat
tactaccaaccggaagcgtacatcccttcttccgatacgtatattgagaaggattccagc
atcaatgaggagattgataaacttcgccactcagccacaagctctctgtttgagcgtcgt
gacgttattattgtagcgagtgtctcttgcatttatggtttgggttccccgaaagaatat
tcaagcttgctgctctcgcttagagtcggcatggagaaaccccgcaatcagattttgtcc
cgcctggtcgatattcaatatcagcggaacgatatcaacttcgtgcggggtactttccgt
gtacggggggatgttgttgagatattcccggcttcccatggagaaaatgcaatacgggta
gaattgttcggagatgaaattgaacgaattactgagattaatgtgcttacaggtgaattg
atcggtgaacgtgaacatatcgctattttcccggcgtctcactttgttactcatgaggat
acgatgagggtagcattggttaacattgaacgtgagctagaagagcggttagcagagctg
aaggaacaagggaagctgttagaggcgcaacgtttggagcaacgtacccgctatgatatc
gagatgatgagagaggttggcttttgttccggtgtcgaaaactactcgggtccactgaca
ttccgcgagcgcggagcgacaccatatactcttttggattactttccagatgatatgctg
atcgtcatcgacgaatctcatgttacattgccgcagattcgtgcgatgtataacggggac
caagcgcgtaaaaatgtgctggttgaacatggttttcgtttgccatctgccttggataac
cgtccgctgaagttcgaagagttcgaggacaaagtgaatcagattatctatgtatcggct
actccaggcccgtatgagatggaaaaatgcgatacgatggtgcagcagattatccgtcct
accggtctccttgatcctattattgaggtgcgtccgagtaaagggcagattgacgatctc
attaatgaaatacggcagcgcatagaacgtgaagaacgggtactggtcaccacactcacg
aagaaaatggctgaagatttgactgactacttaaaagaagtgggcatcaaagttcgatat
atgcactctgagattaagactttggagcggatggccattttgcgggatcttcgtctggga
accttcgatgtgctgatcgggatcaacctgttgcgggaaggtctcgatttgccggaagta
tcgctggttgcgattttggatgcggacaaagaaggcttcctgcgttctgagcgctctctg
attcagacgatcgggcgggcagcacggaatagtgacggacgtgttattatgtatggcgat
aagattaccgattctatggataaagcgatcaaggagacggaacgtcgccgtgcgattcaa
attcaatacaatgaagaacatggaattaccccgcaaaccatccgtaaaaagattcgtgat
gtcattgaagcaaccaagacggcagagtccaagaatgattaccttcctaatgagacgggt
aaactttccaagaaggagcgtcaatccctcattcagcgcctagaagcagaaatgaaggac
gcggccaagaatctacaattcgaacgggccgccgagttgcgtgatgctttgctggagttg
cgggctgattaa

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