Paenibacillus polymyxa Sb3-1: RE92_14680
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Entry
RE92_14680 CDS
T03812
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppoy03400
]
RE92_14680
DNA repair and recombination proteins [BR:
ppoy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RE92_14680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA_22
AAA_16
NTPase_1
DUF7125
KdpD
nSTAND3
AAA_24
AAA_14
ADH_zinc_N
AAA
ATPase_2
NPHP3_N
HypA
SLFN-g3_helicase
AAA_5
NACHT
Motif
Other DBs
NCBI-ProteinID:
AJE52215
LinkDB
All DBs
Position
3343141..3344514
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AA seq
457 aa
AA seq
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MAKVKTKFSCTECGYESPKWYGKCPGCQAWNSMVEETESVVKTQGMGSSLLTHSTKDKPL
PIIEVESGKETRILTGIGELNRVLGGGVVPGSLVLVGGDPGIGKSTLMLQTSNELALTGL
KVLYVSGEESVRQTKLRADRLGALSPSLYVLCETNLETIEEAVDSLKPEFLVIDSIQTVY
LPEVTSAPGSVAQVRECTSRFMRIAKGLGIATVLVGHVTKEGAIAGPRLLEHMVDCVLYF
EGERHHTYRLLRAVKNRFGSTNEIGIFEMAESGLREVANPSELFLSERPLGVAGSTVVAS
MEGTRPVLVELQALIAATHFPSPRRMGTGIDHHRMGLIIAVLEKRMGMFLQNQDAYLNVA
GGVKLDEPAVDLAIAVSIASSFRDAPTKPYDVIFGEVGLTGEVRAVSRAEQRVREAEKLG
FKRVIMPEKSLKGWTHPKGIQIIGVGTVADALAAALD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagtgaaaactaaattttcctgtacggaatgtggctatgaatcgcctaaatgg
tacggaaaatgccctggatgccaggcatggaattccatggtcgaagaaacggaaagcgtt
gtaaaaactcaaggaatgggatcttcccttcttactcatagcacaaaagacaaaccgctt
cctattattgaagtggaaagtggcaaagaaacacgaattttgacgggaattggtgaatta
aatcgtgtacttggtggaggtgtggtgccaggttcacttgttctggtgggtggtgatccg
gggatcggcaagtctacgcttatgctgcaaacctctaatgagctggctttaactggttta
aaggttctgtacgtgtctggtgaggaatccgtccgccaaacaaagctacgtgcagatcgc
ctcggtgccttgtctcccagtctgtacgtattatgtgagacgaatttggagacgattgaa
gaagcagtggacagcttgaagccagagtttttggtcatcgactcgatacagactgtatat
ttacctgaggtgacaagtgcgcctggtagtgtagcacaggtgcgcgagtgtacttcacga
tttatgcggattgccaaaggattaggtattgctacagtactggtagggcatgtgaccaag
gaaggcgctattgcaggtccgcgtttgttggagcatatggtcgattgtgtactttatttt
gaaggagagcgtcatcatacgtatcggctgttgcgtgcggttaagaatcgctttggttct
acaaatgaaattggtatttttgaaatggccgaaagtggtttgcgtgaggtggcgaatcct
tctgaacttttcttgtccgaacggccactgggggtggcaggttccaccgtcgttgccagt
atggagggaacccgacctgtattggttgaactgcaagcactaattgcagctacacatttc
ccatctccacgccgaatgggtacggggatcgaccatcatcggatgggattaatcattgcc
gtcctagaaaagcggatgggcatgtttttgcaaaaccaggacgcttatctcaacgttgct
ggaggcgtaaagctggatgaaccagcggtggatttagctatagcggtgagcattgcttcc
agctttagggatgctcctaccaagccgtacgatgtgatttttggtgaagtaggactgaca
ggcgaggtgcgggctgtatcccgagcagaacagcgagtgcgagaagcggagaagttaggt
ttcaaacgggtgatcatgcccgagaaaagcttaaagggctggacacatccgaaagggata
caaattataggagttggaacggtggcagatgcactggcagccgcattagattag
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