Paenibacillus polymyxa Sb3-1: RE92_14970
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Entry
RE92_14970 CDS
T03812
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppoy03016
]
RE92_14970
Enzymes [BR:
ppoy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
RE92_14970
Transfer RNA biogenesis [BR:
ppoy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RE92_14970
Prokaryotic type
RE92_14970
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AJE52272
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All DBs
Position
3388305..3389090
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AA seq
261 aa
AA seq
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MRNLCMKVNYDGTHYDGFQTQPSGNTIQDCLENAIYSLTGERLKITGSGRTDAGVHAYGQ
VFNFHTESPIPIHRWCLALNAWLPRDIIVTDAREVPLSFHARRMAKRKTYRYSINANRFP
DIFHRRTQAHHPTSLDVRAMEKGLAHLVGTFDYTSFASRRSQKTNHVRTIYEAYITVDHS
FSRPGSDDQGIIHTYITGSGFLQHMVRIIMGTLLEVGEGKKSPDDIPSILEAKNRSKAGP
TAVGHALTLWNVEYEENIKKH
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcggaacttgtgcatgaaggtgaactatgatggaacccactatgatggctttcagacg
cagcctagtggcaacactattcaggactgccttgaaaatgctatatactcattgacgggc
gaacgtctgaaaattacgggctcaggacggacagatgcaggtgtgcatgcatacgggcag
gtattcaattttcatactgaatcgccgattccgatacatcgctggtgtctggcacttaat
gcctggctgcctcgtgatatcatcgttacggatgcgagagaggtgccactgtcctttcat
gcacgccgcatggcgaagcggaagacgtatcggtacagtattaatgcgaaccggtttcca
gacatctttcaccgtcgtacacaggcccatcatccaacgagtctggatgtaagagcgatg
gaaaaggggttggctcatttagtgggcacctttgactatacttcgttcgcatctcgacgt
tcccaaaagacgaaccatgttcgcactatttacgaagcctatataacggtagaccattcc
ttttcgcgtccagggtcggatgatcagggaattattcatacgtatattacaggtagcgga
tttttgcagcacatggtccggattataatggggactttgctggaagtgggagaaggcaaa
aaatcgccggatgatattccttccattttggaagcaaaaaaccgttcaaaggccggacct
actgccgttggacatgctttaacgctctggaatgtagagtacgaagaaaacatcaaaaaa
cattga
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