Paenibacillus polymyxa Sb3-1: RE92_15470
Help
Entry
RE92_15470 CDS
T03812
Symbol
cpdB
Name
(GenBank) 2', 3'-cyclic nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Pathway
ppoy00230
Purine metabolism
ppoy00240
Pyrimidine metabolism
ppoy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
RE92_15470 (cpdB)
00240 Pyrimidine metabolism
RE92_15470 (cpdB)
Enzymes [BR:
ppoy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
RE92_15470 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
RE92_15470 (cpdB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PGA_cap
Motif
Other DBs
NCBI-ProteinID:
AJE52348
LinkDB
All DBs
Position
3526177..3528078
Genome browser
AA seq
633 aa
AA seq
DB search
MDILDVNDKTGREYAGAVKVKFRIMVTTDLHVSLWNYDYYTDQETLHYGLAQTASLIHTA
RAEVPNHLLLDNGDVIQGNPMGDYAVQRLQRDPSEVHPVYKAMNLLGYEAGSIGNHEFNY
GLEYLQTCLRGAQFPYVNANIYIAGEEEQNYFTPYLLLDKTVEDEAGGKHLLKVGVIGFV
PPQIMQWDKAWLEGKLIVKDMLEAARRFIPEMQAAGADLIIAMPHAGFEDIPETPNMENA
VLHLSRVEGIDAIVFGHAHKVFPGPSFIGMTGVNAEQGTIHGIPAVEPGFWGDHLGIIDL
DLALIGGKWQVAASAAEVRPVYDPIRKEALVQPDTAIQQAVADEHAGTLDYIRAPVGRTT
VAVNSFFAQVMDDASVQLVNDAQIWYVKQQLQGSEYEGLPVLSAAAPFKTGGRYGPAYYT
DIPAGTIAIKHIADLYNFPNTLHVVRLSGAEIREWLEWSAGQFRQIDPSAEEEQELINSE
FPSFNFDIIDGIEYQIDVTQPARYDAAGELKDLDAHRIIHMSFEGEPMDMQRSYLVVTNN
YRAFSSALVNPGGERIVLASPDENRHVLTEYVRHMKTLTTKADGHWSLAPWSGRPHVTFL
TSPQATHVANAYSELLYEGLTVEGYAKFALDFR
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
ttggatattttggacgttaatgataagacagggcgggaatatgcaggtgctgtgaaggtg
aaattccgcattatggttaccaccgatctgcatgttagcttgtggaattatgattattat
acagatcaggaaacactgcattacggtctggcgcaaaccgctagtctgattcacacggct
cgggcagaagtgcccaatcacctgctgctggataacggagatgtgattcaggggaatccg
atgggagattatgctgtacagcggctccaacgggacccaagcgaggtgcatcccgtctat
aaagcaatgaatctgctggggtatgaggcaggtagtattggtaatcatgaatttaactat
gggttggaatatttgcagacttgccttcgaggagcacagtttccttatgtgaatgccaac
atctatatagcgggagaggaagaacaaaactacttcacgccttatctattgctggataag
acggtagaggatgaagcaggcggtaagcatctgctgaaggtgggagtcatcggctttgtg
cctccgcaaattatgcaatgggacaaggcatggttggaaggaaaacttatcgtcaaagat
atgctggaagccgccagacggtttattccagaaatgcaggcggctggagccgacctcatt
attgctatgcctcatgcaggctttgaggatattcccgaaacccccaatatggaaaatgcg
gtgctgcatctgagcagggtggaggggatcgatgccattgtgtttggtcatgcacataaa
gtatttcctggcccttcgtttataggtatgacaggtgttaatgcagagcagggcaccatt
catggcattccagcagtagagccgggcttctggggagatcatctgggtatcattgatctg
gatctggctcttattggaggaaagtggcaagtggctgcatctgctgccgaggtacgcccg
gtgtatgacccgatacgcaaggaagcactcgtccaaccagatactgctattcagcaggcg
gtagcagatgaacatgctggaaccctggattatattcgtgcacctgtaggtcgaacgacg
gtagcagtgaacagcttttttgcccaggtgatggatgatgcttcggttcagcttgtgaat
gatgcacaaatttggtatgtgaaacagcagctacaagggagcgagtatgaggggttgccc
gttctgtcggcagcagctccttttaaaacagggggcagatatggtccggcgtattatacc
gatattcccgcagggacgatagcgatcaaacatatcgccgatctgtacaattttccgaat
acgctgcatgtcgttcgactgagtggggcagaaattcgggaatggctggagtggtctgcc
ggtcaattccggcaaattgatccttcggcagaggaggagcaagagctgattaattctgag
tttccaagctttaattttgatatcatcgatggcattgagtaccagattgatgtaacacag
ccagccagatatgatgctgccggggaactaaaggacctagatgcgcacagaatcattcat
atgtcttttgaaggggaaccgatggatatgcagcggagttatctggttgttacgaataac
tatcgcgcgttctcctctgcgttggttaatccaggtggggagcgaattgtactggcttca
ccggatgagaaccggcatgtgctgactgagtatgtgcggcatatgaagacgttgacgaca
aaggctgacggtcactggtccctcgccccatggtcgggtcgtccacatgtgacgttccta
acctcgccgcaagcaacgcatgttgccaatgcttattctgaattgctttatgaagggttg
acggtagaaggatacgctaagtttgctcttgattttcggtga
DBGET
integrated database retrieval system
