Paenibacillus polymyxa Sb3-1: RE92_16880
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Entry
RE92_16880 CDS
T03812
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Pathway
ppoy00020
Citrate cycle (TCA cycle)
ppoy00190
Oxidative phosphorylation
ppoy00650
Butanoate metabolism
ppoy00720
Other carbon fixation pathways
ppoy01100
Metabolic pathways
ppoy01110
Biosynthesis of secondary metabolites
ppoy01120
Microbial metabolism in diverse environments
ppoy01200
Carbon metabolism
Module
ppoy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppoy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RE92_16880 (sdhB)
00650 Butanoate metabolism
RE92_16880 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
RE92_16880 (sdhB)
00720 Other carbon fixation pathways
RE92_16880 (sdhB)
Enzymes [BR:
ppoy01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RE92_16880 (sdhB)
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Gene cluster
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Motif
Pfam:
Fer2_3
Fer4_8
Fer4_7
Fer4_9
Fer4_10
Fer4_17
Fer4_2
Fer4
Fer4_4
Fer4_21
Fer4_13
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
AJE52601
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All DBs
Position
3822599..3823366
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AA seq
255 aa
AA seq
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MSEQAVKSNKTVKFVVTRQDEPNASSYTEEFELAYRPGMNVISALMEIQRNPVDSQGKET
APVCWESNCLEEVCGACSMVINGKPRQACAALVDKLEQPITIAPMSTFPVVRDLVIDRSR
MFNALKKVKAWIPIDGTYDLGPGPRMAEKKRQWAYELSKCMTCGVCLEACPNVNEKTTFI
GPAAISQVRLFNSHPTGEMNQEERLDALMTDDGLEGCGNSQNCVRSCPKGIPLTTSIAEM
NKQTTKHMFKRWLTV
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagcaagcagtgaagtcgaataaaacagtgaagttcgtggttactcgtcaggat
gagcctaatgctagttcctatacggaagaatttgaattggcctacagaccgggaatgaac
gtgatcagcgcgctgatggaaattcagcgtaacccggtagacagccaaggtaaagagacg
gctccggtgtgctgggagtcaaactgcctggaggaagtatgtggagcttgttctatggtg
attaacggcaagccacgtcaggcgtgcgcagcgctcgtcgataagctggagcagccgatt
acgattgcgcccatgagtacattcccggtagtacgggatttggtcattgaccgcagccgg
atgtttaacgcgctcaagaaggtcaaagcgtggattccgattgacggtacctacgatctg
ggaccgggtcctagaatggcagagaaaaagcgtcagtgggcatatgagctgtccaagtgc
atgacctgtggtgtctgtctggaagcatgcccgaacgtcaatgagaagacgacgttcatc
ggtcctgcggcgatatctcaggttcgcctgtttaacagccatccgacaggggaaatgaat
caggaagagcgcctggatgcattgatgacggacgacgggctagaaggctgtggtaattcg
caaaactgcgtacgctcttgcccgaaaggcattccgttgacaacttctattgccgaaatg
aacaagcaaacgactaagcatatgtttaagcgctggctgactgtgtag
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