Paenibacillus polymyxa Sb3-1: RE92_17875
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Entry
RE92_17875 CDS
T03812
Name
(GenBank) ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoy03019
]
RE92_17875
03009 Ribosome biogenesis [BR:
ppoy03009
]
RE92_17875
Messenger RNA biogenesis [BR:
ppoy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RE92_17875
Ribosome biogenesis [BR:
ppoy03009
]
Prokaryotic type
rRNA processing factors
RE92_17875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
Motif
Other DBs
NCBI-ProteinID:
AJE52783
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All DBs
Position
4042422..4043606
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AA seq
394 aa
AA seq
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MKQMIVQCQQQMTQMALLEEGRLVEYAAELPRKRGILGSFFKARVVNVLPGMQAAFVDIG
QRKNAFLYVDDVLHAHLDKQPEVKPSISELLKVGQEIVVQVLKEAVGSKGARVTTHFSLP
GRWIVYMPRADYVAVSKKIEREGERARLKAMGEQLRTGEEGLIIRTVSEEMSIEAIENDL
NQLRKQWVAIQRKAGEHSAPCELHRDLSIVQRLIRDVFTPEQDELVIDSEEQAKDAEVML
QQIGSAKAHVSIFRSAEETIFKAYGIHEQLERDFARKVWLQGGGYIVIDHTEALTVVDVN
TGKFTGGSNLEETVTQTNIEAAEEIARLVRVRDIGGIIIIDFIDMEQEENRREVSSVLEA
RLKKDRTKSYVVGWTRLGLLEMTRKKVREEKTLV
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaatgattgtacaatgccaacagcagatgacccaaatggcactgttggaagag
ggacgattggttgaatatgcggctgaactaccgcgaaaacggggaattctaggttctttt
ttcaaagcgagggtggtcaatgtgctaccaggaatgcaagccgcctttgttgacattgga
cagcgcaagaatgcctttttgtatgtggatgacgtacttcatgctcatttggacaagcag
ccagaggtaaagccgtccatttctgaactgttaaaggtggggcaggaaattgtagtacaa
gtattaaaagaggcggttggtagcaaaggagccagggtgaccactcatttttcacttccg
ggccgctggattgtatacatgccccgggctgattatgtggccgtatccaagaagattgag
cgtgagggagaacgtgcccgtttgaaagccatgggagagcagctacgcacgggtgaggaa
gggctcatcattcgtacggtttcagaggaaatgagtatagaggcgattgaaaatgatctg
aatcaactacgtaagcaatgggtggctattcagcgcaaagcgggtgaacactccgcaccg
tgtgaattgcaccgagatctgagtatcgttcagcgtttaattcgcgatgtgtttacacct
gagcaggatgaactggtcattgacagcgaggagcaagcaaaggatgcagaagtaatgctg
caacagattggttctgcgaaagctcatgtaagtatatttcgcagtgcagaagaaacgatt
ttcaaagcttatggcattcatgagcagctggaacgcgattttgcacgaaaggtatggctt
cagggtggcggatacattgtcattgatcatacggaggcattgaccgtcgtggatgtgaac
actgggaagtttacgggcggcagtaatttggaagagacggtgacccagactaacattgaa
gcagcagaagagattgcccgcctggtacgtgtacgtgatattggaggtattatcatcatt
gatttcatcgatatggaacaagaggagaatcgtagggaagtatcttctgtgctggaggca
agattaaaaaaggaccggactaaatcatatgttgtcggttggacgcggttaggtttactg
gaaatgacccgcaaaaaagtgcgtgaagaaaagactctcgtgtag
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