Paenibacillus polymyxa Sb3-1: RE92_18680
Help
Entry
RE92_18680 CDS
T03812
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppoy02000
]
RE92_18680
Transporters [BR:
ppoy02000
]
Other transporters
Pores ion channels [TC:
1
]
RE92_18680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-ProteinID:
AJE52920
LinkDB
All DBs
Position
4228176..4234430
Genome browser
AA seq
2084 aa
AA seq
DB search
MKNKSRKTNRNKKPLYRVIDPDMNELSMIQRSKPLPAERETEARLHQVASPPPPTTEESE
LQTVIEPEVEALHEKEIEVADVEETPALMEEPPLPELEPEQELDPEPEPEPEPEPDPIDV
EEILNNKKAPHVNNAFIYTDDLSDFAVTGEKIAPASIDSSKLKQESIQTEFLADYAVHTI
KIADGAVTASKIAPDSITVEHLSDASVAGSKLQDRSISGEKLRDGSITPEKLADKIISGD
HIANGSIESRHFKQWIVSSDMLQDQSVTSDKIRSGTIQSNNLANEAVDSSKLGDQSVTTS
KLRDGAVDGTKIQAGSIESAHLTEHAVHARHLAPGSINRKQLSDGLVGREQLEEGVVSGR
HLESEAVTSTHIQAGAIERKHLSPGSIGEEQLGTGQVTARHIADRSIQSNKLADQSVGSL
QIVDQSVTSSKISDQSILPHKIADEAVLTRHIATAAIQGPQISPEAVSSVHLQSEIIRKD
HIAPEAVTEQHLHSGAVTSEKIGKGAVLDHHVANQAIKENHIASSAIKSDKIADEAVIET
KIGTGAVTGNKVASQAITHVHIATGVIRENHLADNSVGGKALQAQSVDSAHLAQSSVQSK
HLGEDSVGTAALQEQSVTADILGEGAVHTAHLASGAVYSHHLQDHAVTSLKLSPESVATD
KINDLAITAPKLAEGSVTSSKLSARSVQPWHITDKAVLSNHLAVEAVEANHLAPESVTSN
HLQSASVQTKHLAPDSVSGHALQSESVTSEKLAARAVQASNLAENSVGPGHLAAQAVQTR
HLAAGSVEDTILAQNAVKSEHLAAESIQSEHLQSGIIQGEHIALQAIATQAIQDEAVTSA
KLSEESVTSTKLSAHAVQSGHIMDEAVQSNHLAVAVVDSTHLASGAVTSVHLQASSVLTR
HLAPDSVSGRALQAESVTSEKLAARSVQGMNLAEGSIGPSHLSVQSVHTRHLAAGAVQDR
VLAEGAVKSVHIAPESIQPHHLHTEIIQGEHIASQAISTDALQDESVTSDKLADEGVTAA
KLSAHSVQSWHITDEAVQGNHLAAESIQSNHLAPESVTSAHLQSSSVLTSHLAPDSVSGR
ALQAESVTSEKLAAHSVQGTNLAEDSVGPSHLSAQSVHARHLATGAVQDTTLAKGAVKSV
HITAGSIQPHHLHTGIIQGEHIASQAISTDALQDASVTSDKLVDEGVTAAKLSVNSVQPW
HITDEAVQGNHLAAEAIQSSHLASESVTSRHLQASSVLTSHLATDSVSGRALQAESVTSD
KLAARSVQGTNLAEGSIGPSHLSAQSVHSRHLVAGAVQDRALAEGAVKSVHIAPESIQSH
HLHPGTIQGEHLASQSISTDVLQDESVTSDKLADEGVTAAKLSAHSVQPWHITDEAVQAN
HLAEEAVQSSHLAPESVTSAHLQSSVILASHLAPDSVSGLALQAESVTSEKLAARSVQGT
NLAEDSVGPSHLSAQSVHTQHLAVGAVQDTALAEGAVKSVHLAPESIQPHHLHPETIQSE
HLASLSISTDALQDESVTCDKLANEGVTAAKLSAHSVQPWHIADEAVQANHLAEETIQSS
HLSPESVTSAHLQSSAVLASHLAPDSVSSHALQAESVTSEKLAAHSVQGANLAEGSVGPA
HLSAHSVHTQHLAIGAVQDTALAEGAVKSVHIASESIQPHHLHPGTIQGEHLAYQSISTN
ALKDESVTSDKLADEVVTAAKISPHSVQPWHITDEAVQAHHLAEETIQSSHLAPESVTSA
HLQPSAVTIQHIAPGSVSVHALQAGSVNAEKLALRAVRASNLAEASVSSVHLTEHAVQAQ
HLSEGAIQESALAEGAVQSRHISPDSVQSEHLQAGAIQSQHIGWQAVSEEAIRDGAVTSG
KLADGTVESRHVAEDAIEGHHIAEEVIDSHHLKPGSVTLNQLSTDIHLSGLLPEEGISGD
KLQANSISRSHLQNQVVDSEVLSPEAVGPEHLQAAAVQSHHVAEQSIEGHHLVEGSVGSR
ELELNAVTPEHLSITPVRTCTNQPALQQFGRAPFLLKGSEGETEVTIVFGEPFVNPDYTL
VAMTNHPLFHATLKSQTTHGAVIVVTKWSETAHNYGIVSWIAIG
NT seq
6255 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaacaagagccgcaaaaccaacagaaacaaaaagccgctctatcgtgtaattgac
ccggatatgaatgagttaagtatgatacaacgctcaaaaccactgcctgcggagagggag
acagaagcaagacttcatcaagttgcttctccgcctcccccaactacagaggagtcggag
ctacagacagttatcgagcctgaagtcgaggctctgcacgagaaagagattgaggttgca
gatgtagaggagactccagctttgatggaagaacccccactgccagagctagaaccagag
caagaactagatccagaaccagagccagaaccagaaccagaacctgatccaattgatgtg
gaagaaattttgaacaataagaaggctccgcatgtaaacaatgctttcatctatacagac
gatttgagtgatttcgctgtgacaggtgaaaagatcgctcccgcttctatagattccagc
aagctgaaacaagagagtatccaaacggaatttctagcagattatgctgttcatacaatt
aaaatagctgacggtgctgtgactgcttcgaagattgctcccgactccattacggtcgag
catctgtcggacgcatcagtggcaggcagtaaattgcaggatcgctctattagtggtgaa
aaacttcgtgatggcagcatcactccagaaaagctggcggataaaattatcagcggcgat
catattgccaatggctcgattgaaagccgtcatttcaagcaatggatcgtgtcttcagat
atgcttcaagatcagtcggtcacctccgataaaattcgcagcggtacgattcaatcgaac
aatttggcgaatgaagctgttgatagctccaagctgggcgatcagtctgtgaccacctcc
aaactgcgggatggggctgtggatggaactaaaatccaggcaggcagcattgagagcgca
cacctgaccgagcatgccgtccatgcccggcatctagctccgggttcgattaatcgcaag
cagctatctgacggactagtgggtagggaacaattagaggaaggtgttgtcagcgggcgt
catctggagtctgaggcagtcaccagtacgcacattcaggcaggagcgattgaaagaaag
catctcagtcctggctccatcggggaagagcagcttggaacgggccaagtgacagcccgg
catatcgcggatcggagtattcaatccaataaactggcagatcagtctgtaggctcattg
cagattgttgatcaatccgtcacttcatccaaaatatcggatcagagcattctcccacac
aaaattgccgatgaggcagtacttaccagacatattgcaacagcagccatacaaggacct
cagatttctccagaggcagtttcttccgtgcatcttcaatccgaaattattcggaaagat
catattgcaccagaggcggttacggagcaacatttgcattccggggctgtgacaagcgag
aaaatagggaagggtgcagttctggatcaccatgtggcgaatcaggctatcaaggaaaat
cacatcgcttcgagcgctattaagtctgacaaaatcgctgacgaggcggttatagaaact
aaaattggcacaggggcggtaaccggaaataaagttgcgtctcaagccattacccacgta
cacattgcaacgggagtaatccgtgaaaaccaccttgccgacaacagtgtgggcggaaag
gcgttacaggctcaatcggtggattcagcccatttggcccagagctctgtacagagtaag
catcttggggaagacagtgtcggaaccgcggcgttgcaagaacagtccgttaccgcagac
atactaggcgaaggcgctgttcataccgcgcatttggccagtggtgcggtatactcccac
catttacaggatcatgccgttacttcgttgaaactatcgccggaaagtgtggctacggat
aaaattaatgatttggcgattactgcgcctaagctagctgagggcagtgtcacttcctcc
aagctgtctgctcgttcggtgcagccatggcatattacggataaagcagtactgagcaac
catctggctgttgaagcagtggaggcgaatcatctcgcgccggaatccgtcacctccaac
catttgcagtctgcttcggtccaaaccaaacatctcgccccagatagtgtgtccggccat
gcacttcagtcggaaagcgtcacttccgagaagttagcggctcgggctgtgcaggcttcc
aacctggcggaaaacagcgtgggacctgggcatttggctgcacaggccgtacaaaccaga
catttggccgcaggatcagtagaggacacgatattagcccagaatgctgtgaagtctgag
catcttgcagcagaatccatccaatccgagcatttgcaaagcgggatcattcagggtgag
catattgcattgcaggccatagcgactcaagccatacaggatgaagcggttacctctgcc
aaactatcagaggaaagtgtaacctctaccaagttgtcagcccatgcagtgcagtccggg
catattatggatgaagctgtacaaagcaaccacttggccgtggcggttgtggactcgacc
catctggcatctggagcggtcacctcggtgcacctacaggcctcctcggtgctaacgaga
catttggctccggatagtgtgtccggtcgtgcacttcaagcggaaagtgtaacctcggaa
aaactggcagcccgctcggtacaaggaatgaaccttgcagaaggcagtatcggcccttca
catctatctgtgcagtccgtacacacgcggcatttggcagctggagcggtacaggataga
gtgctggcagagggagcggtgaagtccgtgcacattgccccggaatcgatccaaccacac
catctgcatactgaaatcattcagggcgagcatattgcatcccaggccatatcgaccgat
gctttacaagatgagtctgtgacatctgacaaactggcagatgagggcgtgactgccgcc
aagctgtcggcccactccgtacagtcatggcacattacagacgaagcagtgcaaggaaat
catttggcagcagaatccatccagtcgaaccatctggcaccggaaagtgtcacttcagcc
cacttgcagtcttcgtcagtgctcacgagccatctggccccggatagtgtgtccggccgt
gcactacaagcggaaagcgtcacctcggaaaagttggcagcccactcggtgcaaggaacg
aatcttgcggaagacagcgtcggcccgtcacatttgtctgcacagtcggtacacgcccgg
catttggcaactggcgcagtacaggatacaacgctggcaaagggagcagtgaagtcggta
cacattaccgcggggtcaatccagccgcatcacctgcacacaggaatcattcagggcgag
catatcgcatcccaggccatatcgaccgatgctttgcaggatgcgtctgttacctccgat
aaattggtggatgagggtgtgactgccgccaagctgtcagtcaactcggtacagccgtgg
cacattacagacgaagcagttcaaggaaatcatttggcagcagaagccatccagtcaagc
catctggcttccgaatccgttacctctcgccatttgcaggcttcctcagtgctcacgagt
catctggcgacagatagtgtatctggtcgtgcactacaggcggaaagcgtcacctcggat
aagctggcagcgcgctcggtacaagggacgaatcttgcggaaggcagcatcggcccgtcc
catctgtctgcacagtccgtacacagccgacatctggtagccggagcggtacaggataga
gcgttggcagagggagcagtgaaatccgtgcatatcgctccagaatcgatccaatcacac
catctgcaccctggaaccattcagggcgagcatctggcatctcagtcgatatcgactgat
gttttacaggatgagtctgtgacatctgataaattggccgatgagggtgtgactgccgct
aagttgtcggctcactcggtacagccgtggcacattacagatgaagcagtgcaagctaat
catttggcagaagaggccgttcaatcgagtcatctggcgccggaatctgtcacctcagcc
cacttacagtcttcggtgatacttgcgagtcatttggcgccggatagtgtatccggtctt
gcgctacaagcggaaagcgtcacttcagaaaagctggcagcacgctcggtgcaagggacg
aatcttgcggaagacagcgtcggtccttcgcatttatctgcacagtcggtacacactcag
catttggcagtcggcgcagtgcaggatactgcgctagccgagggggcagtgaagtcggta
caccttgccccggaatccatccagccgcatcacctgcaccctgaaactattcagagcgag
catctggcatccctgtcgatatcgaccgatgcattacaggatgagtccgttacgtgtgat
aaattagcgaatgagggtgtgactgctgccaaactgtcggctcactcggtacaaccgtgg
cacattgcggacgaagcagtgcaagccaatcatttggcagaagagaccatccagtcgagc
catctgtcaccggaatctgtcacttcagcccacttgcagtcttcggcggtacttgcgagc
catctggccccggatagtgtgtctagtcatgcgttacaagcggaaagcgtcacctcggag
aagctggcggcccattcggtacaaggggcgaatcttgctgaaggcagcgtcggtcctgcg
catttgtctgctcattcggtacacacccagcatttggcaatcggtgcagtacaggataca
gcactggcagaaggggcagtgaaatccgtgcatattgcctcggaatcgatccagccgcac
catctacaccccggaaccattcagggcgagcatctggcataccagtcgatatcgactaat
gctctgaaggatgagtctgttacgtccgataaactggcagatgaggtcgtgacagctgcc
aaaatatctccacattccgtacagccgtggcacattacggacgaagcagtgcaagcccat
catttggcagaagagaccatccagtcgagccatctggcgccggaatccgtcacctcagcc
cacttgcagccttcggcagtgacgatccagcatattgcgccagggagtgtatctgttcac
gcgctccaggcaggcagcgtgaacgctgagaagcttgcgcttcgggcggtgcgagcttcg
aatctggcggaagccagcgtaagctctgtacatttgacagaacatgccgtgcaagcccag
catttgtccgagggagcgattcaagagtcagcactggcagagggggcagtgcagtcccgc
cacatttcaccggattctgtccaatccgagcatttgcaagcaggagctattcagtcacag
catatcggctggcaggcggtgtcagaggaagctatacgggatggagcggtgacgtccggc
aaactcgcagatggaacggtggagtcccgccatgtggctgaggacgcaattgaaggccac
catattgcagaggaagtcattgattcgcaccatctgaaacccggctcagtaacattgaat
caattgtccacagatattcatctctcgggacttttgcctgaggaaggaatcagtggcgac
aaacttcaggcaaacagtatatctcgcagccatctgcagaatcaggtcgtcgacagtgag
gtgctgagtccagaagctgtaggtccagagcatctgcaggctgctgcggtacaaagtcat
catgtggcagagcagagcattgaaggtcatcatctggtagaaggttccgtgggctcacgt
gagctggaactgaacgcagtgacaccagagcatttgagcatcaccccggttcgtacttgt
acaaatcagcctgcattgcagcagtttggcagagcgccgtttcttttaaagggaagcgaa
ggagagacagaagtaaccattgtattcggggagccatttgtgaacccggattacactttg
gtagcgatgacgaaccatcctctcttccatgcaacgctgaaatctcagacgactcatgga
gcggtgatcgtcgtaaccaagtggagtgaaaccgcgcataactacggtattgtttcctgg
attgccatcggttag
DBGET
integrated database retrieval system
