Paenibacillus polymyxa Sb3-1: RE92_20140
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Entry
RE92_20140 CDS
T03812
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppoy03016
]
RE92_20140
Enzymes [BR:
ppoy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
RE92_20140
Transfer RNA biogenesis [BR:
ppoy03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
RE92_20140
Prokaryotic type
Methylthiotransferases
RE92_20140
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
B12-binding
DUF576
Motif
Other DBs
NCBI-ProteinID:
AJE53182
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All DBs
Position
4538389..4539732
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AA seq
447 aa
AA seq
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MPSVAFYTLGCKVNFYDTEAIWQLFKKEGYEQVDFDEQTADVYLINTCTVTNTGDKKSRQ
IIRRAIRRNPDAIVAVTGCYAQTSPAEIMDIPGVDLVIGTQDRDKIIPFVKEIQESRQPV
NAVRNIMKTRVFEEMDVPDFAHHTRAFLKIQDGCNNFCTFCIIPWSRGLSRSRDAASIIT
QARQLVHAGYKEIVLTGIHTGGYGDDMDNYDLSDLLWDLEKVEGLERIRISSIEASQIDE
KMLDVLKRSNKLVRHFHIPLQAGDDTVLKRMRRKYTTEEFYNKMLMIRKAMPDVAITTDI
IVGFPGETDEMYRNGYELMKKIGFSEMHVFPYSKRTGTPAARMEDQVDEDVKNARVRELI
ELSEQMQLAYAQKFVGQVLEVIPEVAPKGTEDSGILYGYSDNYIQLVFEGNKDLVGKVCR
VKLTKAGVNESEGQLVRVLENGLQTAL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgccatcagtggcattttacacattaggttgtaaagtaaacttttatgatacagaagcg
atctggcagctgttcaaaaaagaaggttatgagcaggtggattttgacgagcagactgct
gatgtctatttaattaatacatgtacggttacgaacaccggtgataagaaaagtcgtcag
atcattcgccgcgcgattcgccgaaatccagatgctattgtggcagtgacgggctgttac
gctcaaacttctccagctgaaattatggatattccaggtgttgatcttgttattggtacg
caggaccgagataagattattccgtttgtaaaggagatccaagagtcgcgtcaacccgta
aacgcggtgcgtaatataatgaagacccgtgtgtttgaggaaatggatgtacctgatttt
gctcatcatacccgcgcgtttctaaaaattcaggatggctgcaataacttctgcaccttc
tgtattatcccgtggtcgcggggcttatcccgcagccgtgatgcggcgagcattatcaca
caggcgcgtcaactggtgcatgcaggttacaaggaaatcgtcctcacgggtatccatacg
ggtggttatggtgacgatatggataattatgacctatccgatctgttatgggatctagag
aaagtggaagggctggaacgtatccgtatcagttcaattgaagccagccagattgatgaa
aaaatgctggacgtgctgaaacgctccaataagctggttcgccatttccacataccgctt
caagcaggggacgatacggtgctgaaacggatgcgccgcaaatacacgacagaagagttt
tataacaaaatgcttatgattcggaaggcaatgccggatgtagcgattacaacagatata
attgtcggcttccctggggaaacggacgaaatgtaccgcaatggctatgagctgatgaaa
aaaatcgggttttcagagatgcacgtattcccgtattccaagcgtactggaacacctgcg
gcacgtatggaggatcaggtggacgaggacgtgaaaaatgcgcgtgtgcgtgagctgatt
gaactgtcagagcaaatgcagctggcatatgctcagaagtttgttggtcaagtgctggag
gttattcctgaagtagcccctaaagggaccgaagatagcggcatactttacggttatagc
gacaattacattcaactggtgtttgaaggtaataaggatctggttggcaaggtgtgccgc
gtgaagctgacgaaggcaggcgttaatgaaagtgaaggccaattggtccgcgtattggag
aatgggctgcaaacagctttgtaa
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