Paenibacillus polymyxa Sb3-1: RE92_20170
Help
Entry
RE92_20170 CDS
T03812
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppoy03400
]
RE92_20170
DNA repair and recombination proteins [BR:
ppoy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RE92_20170
Archaeal homologous recombinant proteins
RE92_20170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
AJE53188
LinkDB
All DBs
Position
4550805..4551989
Genome browser
AA seq
394 aa
AA seq
DB search
MRILHTGDWHLGRTLEGRSRLKEQEAFLEELVKMADDQQADLIMMAGDVYDSVNPSAAAE
QLFYEASARLTAGGRPLVVIAGNHDQPERVASVTPLVSGRGITLLGLPHGEAVRVRTPRT
GEMACIAALPYPSESRLNELLSEDGDETILREAYSRRVGMLMSQLGTAFQPDTVNLSMSH
IYVLGGLESDSERPIQVGGAYTVDPSALSIGAQYTALGHLHRPQYVKGDGLMRYSGSPLA
YSFSEAGQAKSVSLIDVIAGKPAQVEELYITSGRPLVRWRARGGLEEVYRWLDEGLDADA
FIDLEITLDEAMSMGDIQRLRKSREGIIHIRPVYPEMAAAQLEQQRSELPVHELFRAFYQ
RQTGGAQPDDGLVQLFLELVEQDDARDQAEEDEV
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcggattttgcatacaggtgattggcatttgggtcgcacgttggaagggcgaagccga
ctgaaggagcaggaggcgtttttggaagaattggtgaaaatggctgacgaccagcaggct
gatttgattatgatggctggagatgtgtacgactctgtcaatccttcggccgccgcagag
caattgttttatgaagcatctgcgcgtcttacggctggaggaagaccgctagtcgtcatt
gccggcaatcatgatcagccggaaagggtagcctcggtcaccccgctggtgagcgggcgt
ggaattacattgctgggactgcctcatggggaagcagtacgcgttcgtacaccgcgaacg
ggcgaaatggcatgtattgcagccttgccatatccctccgagtctcgtttgaatgagcta
ttgtctgaagacggagatgaaaccatattacgcgaggcatatagccgccgtgtagggatg
ctgatgtcgcagttaggtacagcgtttcagcccgataccgttaatttgtcgatgagccat
atttatgtgcttggcgggctggagtcggattcggaacgcccgattcaggtcgggggagct
tataccgtagatccgtctgctttgagcattggagcgcagtatacggctctgggtcatttg
catcgtccccaatatgtgaagggcgatgggctgatgcgttatagtggctctccgctggct
tatagcttttccgaagctggacaagccaaatcggtttcgttaattgacgtgattgccggc
aagccagcacaggttgaggaattgtatattaccagtggacgcccattagtgaggtggcga
gcacggggaggtctggaagaggtatatcgctggctggatgaaggactggatgctgatgcc
tttattgacctggaaattacgctggatgaagcgatgtcaatgggagatattcaacggttg
cgcaaaagccgtgaaggcatcattcatattcgccccgtctacccagaaatggctgcggca
cagttggaacagcaacgttcagaactgccggttcatgagctgttccgggcgttttaccaa
cgacagacgggcggagcacagccggatgacggattagtacagttgtttctggaattggta
gaacaggatgatgcaagagaccaagctgaggaggatgaggtatga
DBGET
integrated database retrieval system
