Paenibacillus polymyxa Sb3-1: RE92_20460
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Entry
RE92_20460 CDS
T03812
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Pathway
ppoy00550
Peptidoglycan biosynthesis
ppoy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RE92_20460
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppoy01011
]
RE92_20460
Peptidoglycan biosynthesis and degradation proteins [BR:
ppoy01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RE92_20460
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
AJE53243
LinkDB
All DBs
Position
4617234..4619150
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AA seq
638 aa
AA seq
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MKKSNVIMRRRLVWGLLGLFVLFAALSIRLAYVQLGKGGELSAKAEDSWRRNIPFAAKRG
EILDRQGTALTYNVSSPTVMAIPVQIKEPEETARRLAPLLDMSEDKVLKLITKRTASQKL
QPGGRKITMEKAQKIRDLKLPGIVVAEDNKRYYPYGDLAAHILGFTGIDNQGLTGVEKQQ
NSKLRGIDGSIAYLSDAGGRLMPGSSEKYIEPKDGLNLQLTIDKSVQSIMERELDQAMVK
FQAKSALSIAMNPKTGEILGMAGRPSYEPALYKQYAPEIYNRNLPIWMTYEPGSTFKIIT
LAAALEEKKVNLKNDRFFDPGYIEVGGARLRCWKKGGHGSQTFLQVVENSCNPGFVTLGQ
RLGKETLFKYIRNFGFGSKTGIDMIGEGNGILFKLPQVGPVELATTAFGQGVSVTPIQQV
TAVSAAINGGNLYKPHITKGWIQPETGKVLEKVEPELVRRVVSEDTSRQVREALESVVAK
GTGRPAFIEGYRVGGKTGTAQKVINGRYSSSEHIVSFIGFAPADDPQIVVYTAVDNPKGI
QFGGVVAAPIVQNILKDALIALKIPPRTNQIAKEYKYGEKPIETVPDLVGATAADLYEDM
NMNFILVKSGSGKTVISQAPKPGSRLERGSTIRIYMGD
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagtctaacgtgatcatgcggcgtaggctggtatgggggctactgggattgttc
gtactgtttgcggccttgtcgatccggctcgcctatgttcaattgggtaaaggaggcgag
ctctcagccaaggctgaggattcgtggcgccgcaatattccttttgccgccaagcgtggc
gaaattttggatcggcagggtactgcgctgacctataatgtcagttcaccgactgtcatg
gcgataccagtacagattaaggagccggaagaaacggcacgcaggctggcgcccttgcta
gatatgagtgaggataaagtgctcaagctgattaccaaacgaacagcaagccaaaaactt
cagcccggcggacgaaaaattacgatggagaaagcccagaaaattcgtgatttgaagctg
ccgggtatcgttgttgctgaagacaacaaacgttattatccttatggtgatctagcggct
catattcttggatttaccggaattgataatcaagggctgacaggtgtagagaagcagcaa
aacagcaagcttcgaggaatcgatggaagcatcgcgtatttatcagacgcaggtggtcgc
ctgatgcctggttcttctgaaaagtacattgaaccgaaggatggactgaatttacaatta
accattgataaatcggtgcaatccattatggaacgggagcttgaccaagccatggtcaaa
tttcaggcgaaatccgcgctgtctattgcgatgaaccccaagacgggtgaaatattaggc
atggctggacgaccaagctatgagccagcgctttacaagcaatatgcgcctgaaatttat
aatcgaaatctgccaatttggatgacatatgaacctggttctacttttaaaattattaca
ctggccgctgccttggaagaaaagaaggttaatcttaaaaatgaccgtttctttgatccg
ggatatattgaagtcggtggagcacgcctgcgttgttggaaaaaaggcgggcatggcagc
caaacctttcttcaagtggtggagaattcatgcaatccgggttttgtaacgttggggcaa
cgtctgggcaaagaaacactgttcaagtacattcgcaatttcggcttcggcagcaaaaca
ggaattgacatgatcggtgagggcaatggcattttgttcaagctacctcaggtcggacct
gtagagctggctactacggcctttggtcaaggggtatctgtcactccgattcagcaggtt
acggctgtgtcggcagcaatcaatggtggcaatctttataagcctcacatcacaaaaggc
tggattcagcccgaaaccggaaaggttctagaaaaagtggagccggaactggtgcgtaga
gttgtttcagaggatacctctcgacaggtaagggaagcgctggaaagtgttgtagctaaa
ggtacaggtcgtcctgcctttattgagggttaccgggttggaggtaaaacgggtacagca
caaaaagtaattaacggacgttattcttcctcggagcatattgtatcctttattggtttt
gctccggcggatgatccgcaaatcgtcgtctatactgctgtcgataacccgaaaggaatt
caattcggcggtgtggttgctgcgccaatcgtgcaaaatattttaaaagatgcactgatt
gccctgaaaataccacctcgtaccaatcaaattgccaaagagtacaagtatggggaaaaa
ccgatcgaaacggtacctgatctagtaggtgccactgcagctgatttatacgaagatatg
aatatgaactttatactcgtgaaatctgggtcaggcaagacggtcataagtcaggcaccg
aagccaggctctcgattggaacgaggatcaacgatccgtatatatatgggggattga
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