Paenibacillus polymyxa Sb3-1: RE92_20870
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Entry
RE92_20870 CDS
T03812
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Pathway
ppoy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RE92_20870
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppoy01007
]
RE92_20870
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppoy03016
]
RE92_20870
03029 Mitochondrial biogenesis [BR:
ppoy03029
]
RE92_20870
Enzymes [BR:
ppoy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
RE92_20870
Amino acid related enzymes [BR:
ppoy01007
]
Aminoacyl-tRNA synthetase
Class II (A)
RE92_20870
Transfer RNA biogenesis [BR:
ppoy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RE92_20870
Prokaryotic type
Other AARSs
RE92_20870
Mitochondrial biogenesis [BR:
ppoy03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
RE92_20870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA_anti-like
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
AJE53321
LinkDB
All DBs
Position
4751795..4753564
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AA seq
589 aa
AA seq
DB search
MHRYRTHNCGELDQTHVGEIVRIAGWIKNIRNLGGIVFIDLRDHYGVTQIVVSDPNELKD
FVSKISRESTISVIGAVCHRSESTISPHMKTGYIEVVAKEIEVLGKVMNPLPFEVSSAHE
AREDLRLKYRFLDLRNEKLHDNIVLRSRVIQSIRKKMIDLDFLEIQTPILTSSSPEGARD
YLVPSRVHPGQFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDL
EMAFATQEDVFNVVENMLYEVFSEFTNYKISKPFSRIPYQEAMLKYGSDKPDLRNPLIIH
DVTELFTETDFKVFKNKMIRVIAVPGCGGQPRSFYDDIVNFAIEAGAKGLSWIKFNDDMS
LSGSVAKFIPEKVKNELMNITQAGPGYALFFAADELKNAEKIAGAVRNQLGKRLDLLEKD
TFKFCWIVDFPMFELDPDTHKIEFSHNPFSMPQGGMDALLNMNPLDILAYQYDIVCNGIE
LSSGAVRNHDTEIMVKAFEIAGYTYEEIKSRFPALFNAFQFGPPPHAGIAPGIDRIVMIL
ANESNIREVIAFPMNSKAQDVLMGAPSEVTDKQLRDVHIKLANAQPQTE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
gtgcataggtatagaactcataactgtggagaactggatcaaacgcatgtcggggaaatc
gtgagaattgcaggttggattaaaaatattcgtaaccttggcgggattgtttttattgac
cttagggaccattatggggttacgcaaatcgttgtctctgatcctaatgaattaaaggat
tttgtatccaagatcagcagggaatcaaccatctctgtcataggagctgtatgtcacaga
tccgaaagtacgatcagtccccatatgaaaaccggatatattgaggtcgttgccaaggag
atagaagtgttaggaaaggtcatgaatccattgccttttgaagtatcttcagcacatgaa
gctcgggaagatttaagattaaagtatcgttttctggatctgcgcaatgaaaaactgcat
gataatattgtacttcgttctagagtaattcaaagtatccgaaaaaagatgattgatttg
gattttttagagattcagacaccgattctgacaagttcatctccagagggcgccagagac
tatttagttcctagtagagtgcatccaggccaattttatgccttgcctcaggcacctcag
caatttaaacaactattaatggtctctggctttgataaatattttcaaattgcaccgtgc
tttagagatgaagatgcaagggcagacagatcgcctggcgagttttatcagctggatttg
gaaatggcatttgctacacaggaagatgtttttaatgtagttgaaaatatgctgtatgaa
gttttttccgaatttacaaattataaaatttcaaagccttttagtagaattccctatcaa
gaagccatgctcaaatatgggagcgataaacctgacttaagaaatccattaattatccat
gatgttacagagctttttacagagactgattttaaagtgtttaaaaataaaatgataaga
gttattgctgttcctggttgtggagggcagccaagaagcttttacgacgatatagtgaac
tttgcaatagaggcaggggcgaaaggcctttcatggattaagttcaatgatgatatgtct
ctcagcggctcggttgcaaaatttattccggagaaggtaaaaaacgaattaatgaatata
acgcaagctggtccgggatatgcactgttttttgctgccgatgagcttaaaaatgccgaa
aaaatagctggtgctgtccgaaatcaattaggcaaacggctggatttattggaaaaggat
acgtttaagttttgctggattgtcgatttccccatgtttgaattggaccctgatactcat
aaaatagagtttagccataacccgttttcgatgccgcaaggtggtatggatgcgctgctg
aatatgaatcctctggatatcctggcgtaccaatatgatattgtatgtaatgggattgag
ctgtcctcgggtgctgtccgtaaccacgatacagagattatggtaaaagcctttgagatc
gcgggttatacatatgaagagatcaagagtagatttcctgcactctttaatgcttttcaa
tttgggccacctcctcacgcaggtatagcacctggaattgataggattgtgatgatcctt
gcaaatgaatcgaatattcgagaggttattgcttttccgatgaatagtaaagcacaggac
gtattaatgggagctccttcggaggttactgacaaacaattgagagatgttcatatcaaa
ttggcaaatgctcagccacaaacagaataa
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