Paenibacillus polymyxa Sb3-1: RE92_21850
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Entry
RE92_21850 CDS
T03812
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Pathway
ppoy00300
Lysine biosynthesis
ppoy00470
D-Amino acid metabolism
ppoy01100
Metabolic pathways
ppoy01110
Biosynthesis of secondary metabolites
ppoy01120
Microbial metabolism in diverse environments
ppoy01230
Biosynthesis of amino acids
Module
ppoy_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RE92_21850
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RE92_21850
Enzymes [BR:
ppoy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RE92_21850
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AJE53512
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Position
4968469..4969836
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AA seq
455 aa
AA seq
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MYLHGSSKINSNGHLEIGGCDTTLLKERFGTPLYIVDEQLVRRRCREFIEAFRETGLKFQ
VAYASKAFCVMAMCALAAEEGMSLDVVSSGELFTALQAGFPAERIHFHGNNKTPEEIEMA
LEAQIGCFVVDSKMELHLLQALASEKGQQVNILLRVTPGVEAHTHEYMATGQEDSKFGFD
IANGTARQAVEQAIKLDHLNLLGVHSHIGSQIFEVNGFQMAAERVAVFCREIKEQLQYSF
KVINLGGGFGIRYTEEDTPLKLSTYVQAIGEAVKTHFSGLYDELPEIWIEPGRSIVGDSG
TTLYTVGSIKDIPQVRKYVSVDGGMTDNPRPALYQAKYEAMLANRAQDANEETVSIAGKC
CESGDMLIWDVELPRPNSGDLLAVASTGAYNYSMASNYNRIRRPAVVFVNNGEAELVVRR
ETYEDIVRNDVLPQRLVRDQASSVVQPNAKITVSS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgcatggaagcagtaaaattaacagcaatggacatttggagattggcggatgt
gataccacgcttttgaaagagcgttttggcacgccgctatatattgtagacgaacagtta
gtccgccggcgctgccgggaatttatagaagcattccgtgagaccggtttaaagtttcaa
gtggcttatgcaagcaaagcattttgtgttatggcaatgtgcgctttagctgctgaagaa
gggatgtcgctcgacgttgtttccagcggagagctgttcacagcgctgcaagcaggattc
ccagcagaacgaatccattttcatggcaataacaagacgccggaagaaattgaaatggcg
ttagaggcgcaaattggctgctttgtcgttgatagcaagatggaattgcatttgttacag
gctctcgcctctgaaaaaggacaacaggtcaatattttactgcgggttacgccgggggtt
gaggcgcatacgcatgaatatatggccacaggtcaagaagattcaaaatttggttttgac
attgcgaatggcacagcccgtcaagcggtggaacaggctatcaagctggatcatcttaat
ctgctgggagtacattctcatatcggctcgcaaatcttcgaagtcaatggcttccaaatg
gctgccgagcgggtcgcagttttttgcagggagattaaagaacagcttcagtattccttc
aaggtgattaatctcggtgggggatttggtatccgttacacagaggaggacacaccgctg
aaactatccacctatgtacaggctatcggcgaagcggtaaaaactcatttttcagggctt
tacgatgaacttccagaaatttggattgagccgggacgcagtattgtaggtgattcaggt
acaaccttgtatacggtaggaagcatcaaggatattccgcaggttcgtaaatacgtttct
gtagacggcggaatgacagataatccacgtcctgcactgtatcaggccaagtatgaagca
atgctggctaatcgagcgcaagatgcgaacgaagagacagtgtccattgcaggcaaatgc
tgtgaaagcggcgatatgcttatttgggatgtagaactgcctcgcccgaatagcggagac
ttgctcgctgttgcctcaaccggagcttataattactccatggcgagcaattataaccgg
atacgccgaccagcagttgtatttgtcaacaacggtgaggccgagctggtagtgcgtcgg
gaaacctacgaggatatcgttcgcaatgatgttttgccacagcgcttggttcgtgatcaa
gccagttcagtggttcagcccaatgccaagattacggtttcgtcctga
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