Paenibacillus polymyxa Sb3-1: RE92_23040
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Entry
RE92_23040 CDS
T03812
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppoy03016
]
RE92_23040
Enzymes [BR:
ppoy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
RE92_23040
Transfer RNA biogenesis [BR:
ppoy03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
RE92_23040
Prokaryotic type
RE92_23040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Aspzincin_M35
Motif
Other DBs
NCBI-ProteinID:
AJE53735
LinkDB
All DBs
Position
5216635..5217567
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AA seq
310 aa
AA seq
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MELYFLGTNAGVPTIQRNVTSIALRLLEERRSMWLFDCGEGTQQEVLRSPLKLSRLEKIF
ITHLHGDHLFGLPGLLSSRAYQGGTAPLTVYGPPGLQQYIELSLGISQSRINYQLHIVEH
TGGVLFDDGQFRVESALLDHRIDSYGYRIVEMDKPGKLNQELLERYGIKPGPVYGKLKRG
ESVEVEGGVILNPQDVLGSPKKGRIVTILGDTRPCPNTVVLARDATVVVHEATFLHDLAD
TAYEYHHSTALQAAEAAKAAGAGQLIMTHFSSRYKDQEQLQPLLEEARSLFPNSLLAEQH
VLLPVPDIGQ
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggaattatattttctcggtacaaatgcaggggtacctacaattcagcgaaatgtaaca
tccattgctcttcgtttactggaggaacgaagaagcatgtggttgtttgactgcggtgaa
ggcactcaacaggaagtattgcgttcgccgctcaagctgagcagacttgaaaaaatattt
atcactcatttgcatggggatcatctttttggtctgccgggccttttgtcgagtagggca
tatcaggggggtacggcacctctgactgtatatggaccgcctgggcttcaacaatatatt
gagctatctttagggatcagccaatctcgtatcaattaccaactacatattgtggagcat
acgggcggggtcctgttcgatgatggtcaatttcgggtggaatccgctttgctggatcat
cggatcgacagttatggctaccgaattgtagagatggataagcctggtaagctcaaccaa
gaactgttggagcgatacgggatcaagcctggcccagtgtacggtaaattaaagcgtgga
gaaagtgtggaagtagagggtggagttattctgaatcctcaggatgtattgggttcacct
aaaaaagggcggatcgtcactattttaggtgacacgagaccctgtccgaatacagtagtg
ctggcacgagatgcaactgtcgtcgttcatgaagccacatttctgcatgatctggcggat
acggcgtacgagtatcatcatagtacggcgcttcaggcagcggaagctgccaaagccgca
ggcgcggggcagttaattatgacgcattttagttctaggtataaagatcaagagcagctt
cagcctttgctggaggaagcgcgaagcctattccccaattcattgcttgcggagcagcat
gtgttgttaccggtacctgatatcggtcaataa
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