Paenibacillus polymyxa Sb3-1: RE92_23055
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Entry
RE92_23055 CDS
T03812
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Pathway
ppoy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RE92_23055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppoy03400
]
RE92_23055
Enzymes [BR:
ppoy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
RE92_23055
DNA repair and recombination proteins [BR:
ppoy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RE92_23055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AJE53737
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All DBs
Position
5219759..5220604
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AA seq
281 aa
AA seq
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MPKLLIGSHVSTRGGFSKAAIRAREQGGRSFQYFPKNPRSLKLKEWSSIDAAACKTYCSE
HQLQSIAHSPYPVNPAHGRERGQELYELMVASLRNDLDIAEACGSKGIVVHFGHMHSSDP
LEGYRNIINCLNDVLEGWQGNAKILIENQAGDHGPMGTTLEEMVQIRQLCRDPGSIGFCL
DTCHAYAAGLWNGGMDEALLEKGDRLGYWPALCGVHLNDSKYPYGSKKDRHARVGQGYIG
TEGMRWITEQEAVRGIPVVLESEAGPDGTHQEDIQMIQSWE
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaattgcttatcggctctcacgtgagtacgcgtggtggcttttccaaagctgct
atacgtgcacgagagcagggaggacgttcatttcaatattttccgaaaaatcctcgtagt
ctcaagctgaaggaatggagttccatagatgctgctgcttgtaaaacctactgctcagag
caccaacttcaatctattgctcattcgccatatcccgtgaatccagctcatggtcgcgaa
cgcggtcaggaactttatgaactgatggttgcttcattacgcaatgatctggatattgct
gaagcctgtggatcgaaggggatagttgtccattttgggcatatgcattcgtctgacccg
ctggagggctatcgtaatattattaactgtctgaatgatgtgctggaaggctggcaggga
aatgctaaaatattaattgagaatcaggctggggatcacggtcccatgggaaccacgctg
gaggaaatggttcaaattcgccagttgtgtcgagatcctggcagcatcggattttgcctg
gatacttgtcatgcgtatgcagcaggattgtggaacggtggaatggacgaggctttgctt
gaaaaaggggaccgtctcggctattggccagcactgtgcggagttcatttgaatgattcc
aaatacccgtacggctctaaaaaagacagacatgcgcgcgtggggcaaggttacattggt
actgagggcatgcgctggataacagaacaagaagctgtaagaggtattcccgtcgtattg
gagagtgaggcgggacctgatgggacacatcaggaggacattcaaatgattcaaagctgg
gagtga
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