Paenibacillus polymyxa Sb3-1: RE92_23780
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Entry
RE92_23780 CDS
T03812
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Pathway
ppoy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RE92_23780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppoy02000
]
RE92_23780
Transporters [BR:
ppoy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RE92_23780
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
EAD9
MCM5_C
Motif
Other DBs
NCBI-ProteinID:
AJE54143
LinkDB
All DBs
Position
complement(5420503..5422038)
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AA seq
511 aa
AA seq
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MFKRSYFKLFIPAVMAVMMTACATSPSASSTSSTAPQDKSVTLLFNVQSPSIDPHADINY
TAVRAGVNETLIKVNKDLKLEAWLAEKWDSKDGQHWTFSIRPGVKFHSGKAVDAAAVKAS
LERALKLNPSVKNALHIRDIHAEGQILSITTDKPFPEFVSELVHPNTAIMDTTATGDFPS
GTGPFKVVSFRAGSELNLDRNEDYWNGEVKLKHAKFMFNEDANARQLAFQAKTADIVYRP
PVESLELLKADSTVKVDSLPSLRTHQLIYNMNNHDLKKTAVRKAFDNLINRDEIASGIMS
GQGTPAQGPFLPDFPFSPEYITKNFDLNAAREGFKEAGYTVENGKVTNSDGSSLHLTLLT
YQSRAELPLISQLIQANAKELGITIDIRQVDNIDEYLAAHQDWDLATYSNNTAPRGDASY
FLNAAYMREGALNYGHVHVPELASMITQLNTTVNEEQRNKLALQAVTLIDQENLHSFLVH
PNNVVAYRNYVHNWVTSQSEYYLLTQDLDVN
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
ttgtttaaacgttcgtatttcaaactatttatccctgcggtcatggcggtgatgatgaca
gcctgtgctacatctccatcagcttcatccacatcctctacggcaccacaagataaaagt
gtcaccttattgttcaacgtgcaaagcccttctattgatcctcatgcagatatcaattac
acagccgttcgtgctggagtaaatgaaacactgatcaaagtgaataaggatctcaagctg
gaagcttggcttgcagaaaaatgggacagtaaggacgggcagcactggacctttagcatc
cgaccaggcgtgaaattccatagcggtaaagccgtagatgccgcagctgtcaaagcctct
ttggaaagagcactaaagctcaatccatcggttaaaaatgcgctacatatccgtgatatt
catgcagaagggcagatcttgagcattacgacggacaagcccttcccggaatttgtatct
gagctggttcatccgaataccgcaattatggacaccacagccacaggtgacttcccatca
ggaacggggccgttcaaagttgtcagtttccgtgccggaagtgaactgaatctggatcgc
aacgaggactattggaacggtgaagtaaaattgaaacatgccaaattcatgtttaacgaa
gatgccaatgcacgtcaacttgcttttcaagctaagacggccgatattgtgtatcgtccg
cccgttgaaagtctggagctcttgaaagctgattctaccgttaaagttgactcacttcct
agcctgcggacgcaccaacttatttacaatatgaacaatcatgatctgaaaaagacagct
gtgcgcaaagcattcgataatttgatcaaccgggatgagattgcgagcggtattatgtct
ggtcagggaacccctgctcaaggtccgttcttgccggactttcctttttcaccggaatat
attacgaaaaattttgatttgaatgcagcacgagaaggcttcaaagaagctggatataca
gtggagaacggaaaagttacgaattctgacgggtcctcccttcatcttacattgttaacc
taccagtcgagagcggagcttccactcatttcacagctgattcaggctaacgctaaggag
cttggcatcacgattgatatccgtcaggttgataatattgatgaatatctggccgctcat
caggattgggatttggcgacttacagtaacaatacagctccgcgcggcgatgcaagctat
ttcctgaatgcggcctatatgcgggagggagcattgaattacggtcatgtgcatgtacca
gaactcgcgagtatgattacgcagctgaacacaaccgtgaatgaggagcaacgcaacaag
ctagcgctgcaggctgtcacgctgattgaccaagaaaatctgcactcctttctagttcat
ccaaacaacgtagtggcctatcgtaattacgtacataactgggtaaccagccaaagtgaa
tactatctgttgacccaggacttggatgtgaactag
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