Physcomitrium patens (spreading earthmoss): 112272688
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Entry
112272688 CDS
T01041
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic
KO
K02945
small subunit ribosomal protein S1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
112272688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ppp03011
]
112272688
Ribosome [BR:
ppp03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
112272688
Bacteria
112272688
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RLSB_S1
S1
S1_RRP4
RRP40_S1
STAG_C
Motif
Other DBs
NCBI-GeneID:
112272688
NCBI-ProteinID:
XP_024356465
UniProt:
A0A7I4BL95
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All DBs
Position
19:complement(14132881..14136258)
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AA seq
577 aa
AA seq
DB search
MSARVCSQQLQGLTLCLRGESECVRTLQARGKSLFLEGSGRFACGKLIVSKTRVRSRSTR
SPLWCAEYTDSRDPPHDVRSCELDLVSVGGEDTDPSSEHVPQSIDAEECNNEHISVNGNT
AVAGDGQSTGCANNQVQEQSSSFKEPYKQSKTGCIGVSSVRTTVSKPNYESTVGNTCHSF
SVLLKTSPDRVEFSKLVDDSFEYYVPVVGHRVVGVVVFGNHAKVDVDIGAAQYGQLHMQD
LLPLDQLPIDQNKWILADDTKKGDEAGEGNERGGLGTPPRGLPYVIHDEEVYAYESPAPH
CVDIGTVLEMEVVGKTMTGKPLLSARKAAQRVAWDRVLQIKDEHESIEVEIVDYGKAGVI
ARVEGLRAFLPLTEFVIPPDTSKGESHKDYVGRKLWVCISFAREIRGNIVISEKDAWIQR
NLKLGSLHDGTVTKIVNYGAYVQINRTNIGGIIHISNMSTARINRVSNVLKVGDQVKMIA
VECPTPGKLSFSTALLEFEPGLMLRDKERVFREAEQTATTLRKEHSEGKHPSKNIAERST
YWKTSKSISNLEWLDFRNGESYSNLLLGRLRNECFPM
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcgagtttgtagtcagcagttgcaaggtctgacattatgtctccgcggggag
agtgagtgtgttagaacgttacaagctcgtgggaaaagcctctttctcgaagggtctgga
aggttcgcctgtgggaaacttatagtaagtaaaacgagggttagatcgcgcagcacgcga
tcccctctgtggtgtgctgagtacacagattcacgggatcctcctcacgatgtccgaagc
tgtgagttagatttggtttcggttggtggtgaagacacagacccaagcagtgagcatgtt
ccgcaatcgattgacgcagaggagtgcaacaacgagcatatttctgtgaatggaaacacc
gcagtagcaggcgatggccaatcgactggctgcgcgaacaaccaggttcaagaacagagc
tcttcctttaaagaaccttataaacagagtaagacagggtgcattggcgtttcctccgtc
cgcacaactgtctcgaagcccaattatgaatccactgtcggcaacacttgtcacagtttt
tctgttttacttaaaacatcacccgaccgggtagaattttcgaaactggtcgatgattct
tttgagtattacgtccctgttgttggacaccgtgtggttggggttgtagtattcggcaat
catgctaaagtcgatgtcgacattggcgccgctcagtatggacagctgcacatgcaagat
cttcttcctcttgatcaactcccaattgatcagaataagtggatccttgctgacgatacc
aagaaaggagatgaagcaggcgaaggaaatgaaagaggaggcctcggtacaccacctcgt
ggtcttccttacgttatacatgatgaggaagtctatgcttacgaatctcctgcgccgcat
tgtgttgatattggtaccgttcttgaaatggaggtggtggggaagacgatgactgggaag
ccactcttgtctgcgcgcaaagctgctcaacgcgtcgcatgggaccgcgttctgcagatc
aaagatgagcatgagtccatcgaagttgagatcgttgactatggaaaagctggtgtcata
gcgagagttgaggggctgcgtgcatttcttcctctaactgaatttgtaattccacccgat
acctccaagggcgaaagtcacaaagattatgtaggtagaaaattatgggtgtgcatttct
tttgcaagagagattcgtgggaacattgtcattagtgagaaggatgcgtggattcaacgg
aatcttaaacttgggtctcttcatgatggcactgtaacaaaaattgtcaactatggcgct
tatgtccagatcaaccggacgaacataggtggaataatacatataagtaacatgtcaact
gctcggattaatcgagtttctaacgtgctcaaagttggggatcaagttaaaatgatagca
gtcgagtgtcctactcctggaaagctatctttcagcactgctcttctggagttcgagcct
gggcttatgcttcgggataaggagagagtgttcagagaagctgagcagacagcaacaaca
cttagaaaagagcattccgaagggaagcatccatctaaaaatattgcggagagatcaacc
tactggaaaacttccaagtccatctcaaatttggagtggcttgatttcagaaacggtgaa
tcttacagcaatcttctactcggtagactgcgaaatgaatgttttccaatgtga
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