Physcomitrium patens (spreading earthmoss): 112273082
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Entry
112273082 CDS
T01041
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppp03036
]
112273082
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Meiosis-specific proteins
Others
112273082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_22
AAA_29
T2SSE
Motif
Other DBs
NCBI-GeneID:
112273082
NCBI-ProteinID:
XP_024357230
UniProt:
A9TGP2
LinkDB
All DBs
Position
2:399459..407159
Genome browser
AA seq
786 aa
AA seq
DB search
MADAASSFVVSLIENRAKEVGLAAFDLRTAKLHLSQFIETSRSYQNTTTLLQYFDPTDIV
TPANMITPQGIIGLTSVVNQCTSASKVILSRSCFDDTKGAILVQNLVLNEALNSTLEASY
KQYYLCLGAAAALFRWIDREKGITLANRSVEVTLNGSFDHMNIDGTSVQNLELVESLHIQ
VGPQKKRGCLFEMLKTTKTAGGTRLLRANLLQPLKDKNTINTRLDCLDELTSDDKIFFGI
SRALEMFPKDIDRILCSFCFKAKVSNDSTTKSTTRAGQFMVSNIILLKEALDHLPTLQEA
LQGAKCSLLRNIKDICANPSFRLLLQRIEEVINEDIVHSRALFLSRTQQCFAVKSGIDGY
LDVAREVFSSTSEAIHELARRYREEFNLPNLKMPFNNNRGFYISFPEKDLKQTSIPSIFN
QVIKKEKIICCSTSELTSLNDRNMEAAAECYKRTSLCLGELITRIREDLRLLTSLSESLA
LLDMMVNSFANLISTNPEESYIRPEFTETGPVAIEKGRHPVLESTIPGEFVANNAFLSEA
SNTMIVTGPNMSGKSTYLRQVVLITIMAHIGCYVPARFASFRVVDNIFTRIGTSDNIELN
SSTFMTEMRETAYLLNNLTSRSLVVVDELGRATSTGDGFAIAWSCCEYMLSFKAYVLFAT
HMQRLTELSSVYPNVRVCYFDASILNNRLDFKFLLREGCTNVAHYGIRLAEFAGIPTSVI
NDAKCIAAKIDAKEKNNVSIAHAKYGHLRKDYHIAQKLLCLQYSNLNNDILRAYLKNLQQ
CYVENR
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcagcaagctcgttcgttgtctctctcattgagaatcgagctaaggaggtc
ggtctagcggcatttgacctcagaactgcaaagctacatttatcgcagttcatagaaacc
agtcgttcatatcaaaatactacaacgttgcttcagtacttcgatccgacggatattgtt
acaccagctaatatgattacgcctcaaggcataattggattgacctcagtagttaaccaa
tgtacttcagcttcaaaggtgatattatcccgaagttgtttcgatgatacgaagggagct
atattggttcagaatttggtcctcaacgaagcactcaacagtacattggaagcttcgtat
aaacaatactatctctgtctcggtgctgctgcggcattgttcagatggattgatcgtgag
aaaggcatcacacttgcaaatcgatccgtagaggttactctcaatggatccttcgaccac
atgaatattgatggaacaagtgtacaaaatttggagttagtggaatcgcttcatattcaa
gtcggaccacaaaagaagcgaggttgccttttcgagatgcttaagaccaccaagactgct
ggaggaactcgcctattaagggccaatcttcttcagccattgaaggacaagaacactatc
aacacccgcctggattgcttggatgagctcacaagtgatgacaagatatttttcggaatc
tcacgagctcttgagatgtttcccaaggacatagatcgtattctctgctccttttgcttt
aaggctaaggtaagcaatgattccaccacgaaatcgaccacacgagctggccagtttatg
gttagtaacatcattcttctgaaggaagcccttgaccacttacctactcttcaagaggcg
ttgcaaggtgcgaagtgctctctcctaaggaacatcaaggacatttgtgctaatccatcc
ttccgtctacttctgcagagaattgaggaagtcatcaacgaggacatcgtacattcaagg
gcactgttcttgtctcgtacacagcaatgctttgcagttaaaagtggcattgacggctat
cttgacgtcgcacgcgaagtcttttcttcaactagtgaagcaattcatgagctggccagg
agatatagagaagaattcaaccttccgaacttgaagatgcccttcaataacaatcgtgga
ttttacatcagctttccagagaaggatttgaaacaaacttccataccttcaatattcaac
caggtgataaagaaagaaaagatcatctgttgctccacatccgagctgacgtccttgaac
gacaggaatatggaagccgcagcagaatgctacaaacgaacatctttgtgtcttggagag
ctgatcactcgaatcagagaggatcttcgtctcctaacatcattgtccgagtcccttgcc
cttctggatatgatggtgaactcttttgctaatctgatatcaacgaatcctgaagagagt
tacatcagaccagaatttacagaaactggccctgtggcgattgaaaaaggcagacaccct
gtgttggaaagcaccatacctggagaattcgtggccaataacgcttttttatcagaagcg
tcaaatactatgattgtgacaggacccaacatgagcggcaagagtacctacttgcgccaa
gtagtgctcataacgataatggcacatattggatgttacgtgccagctcgatttgcttca
tttcgtgtagtagacaatatttttactcgcatcgggacttccgacaatatagaattaaat
tctagcacctttatgaccgagatgagggagacggcatatctactaaataatctaacttca
agaagcctcgtggtggttgacgagttgggcagagcaacgtcaactggggatggctttgct
attgcatggagttgctgtgaatacatgttgtccttcaaggcctatgtccttttcgccaca
cacatgcaacgactgacagaattatcaagcgtttaccctaatgtgcgagtttgctatttt
gacgcgagtatcctcaataaccggctggatttcaagtttctacttcgagaagggtgtaca
aacgttgcacattacggcatacgtctagccgagtttgccggcattcctacatctgttata
aatgatgctaaatgcatagcagctaaaattgatgcgaaggaaaagaataatgtctccatc
gcccacgccaagtatggacacctgcgtaaagactaccatatagcccagaagctcctatgc
ttgcaatattcaaaccttaacaatgacatattacgagcttatctcaagaacttgcagcag
tgctatgtggaaaatagatga
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