Physcomitrium patens (spreading earthmoss): 112273352
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Entry
112273352 CDS
T01041
Name
(RefSeq) threonine--tRNA ligase, mitochondrial 1 isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112273352
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppp01007
]
112273352
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppp03016
]
112273352
Enzymes [BR:
ppp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
112273352
Amino acid related enzymes [BR:
ppp01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
112273352
Transfer RNA biogenesis [BR:
ppp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112273352
Prokaryotic type
112273352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
tRNA-synt_His
Motif
Other DBs
NCBI-GeneID:
112273352
NCBI-ProteinID:
XP_024357785
UniProt:
A9U0D5
LinkDB
All DBs
Position
20:12356597..12363341
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AA seq
685 aa
AA seq
DB search
MEEKMSSMALSSPADVKGMADTVIKKRVELFEKLQKEQAEAFRAKGGDPIKITMPDGAVR
DGKKWITSPMDVAREISQGLANSALIAEVNGVLWDMTRPLEGDCTLQLHKFESDKGRDTF
WHSSAHILGQSIEMTYGCKLCIGPCTTRGEGFYYDAFYHGLTLTEKDDFGKIQAQANKAV
KDKQPFERIEVTREQALEFFAENPFKVEIINELPEDKTITVYRCGPLVDLCRGPHIPSTS
HVKAFACLRASASYWRGRADRESLQRVYGISYPDNKLLKEYLHNVEEAKKRDHRKLGQQQ
ELFFFHELSPGSCFFLPHGARIYNKLQAFIRDEYRKRGYEEVVSPNMFNMQLWETSGHAA
NYKDNMFTFEVEKQEFGLKPMNCPGHCLIFDHRVRSYRELPLRLADFGVLHRNELSGALS
GLTRVRRFQQDDAHIFCMESQLLTEVKGALDFLEFAYGVFGFTFELELSTRPEKYLGEIE
TWNRAEKALEAALNAFGKPWQINEADGAFYGPKIDITVFDALKRKFQCATIQLDFQLPIR
FNLSYSTEDEAKREKPVIIHRAILGSVERMFAILLEHYAGKWPFWLSPRQCIVCPVSEKF
THYAVEVRDAINAAGYFCEADVTDRKLQKKIREAQLAQFNYILVVGEEETSKKQVNIRTR
DNVVHGTKSVTELLADFQKETAEYR
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaagatgagctccatggccctcagcagccccgccgatgtcaaaggtatggcg
gacaccgtcatcaagaagcgcgtcgagttgtttgagaagctgcagaaggagcaggccgag
gcgtttcgggcgaagggcggggatcccatcaagattacgatgccggatggagctgtgagg
gacgggaagaaatggatcacatcgcccatggatgttgcgcgggaaatctctcagggactt
gcaaacagcgcgctcattgccgaggtgaatggcgtgttatgggacatgacgagaccattg
gagggcgactgcactctacagttacacaaatttgagtcagacaagggtcgcgacaccttc
tggcactcgagtgctcacattcttggccagtcaattgaaatgacatacggatgcaagctt
tgcattggaccttgcaccactagaggagagggtttctattacgatgctttctaccatggg
cttaccttgactgagaaagatgattttggaaagattcaagcacaagcaaataaagcagtg
aaggataagcaaccttttgagaggattgaagttacccgcgaacaagctttggagttcttc
gcagaaaatccgttcaaggttgaaattatcaatgagcttccggaggataagacaatcact
gtgtacagatgtggtccgcttgtagatctatgtcgtggtcctcatatcccaagcacttct
cacgtgaaggcgtttgcttgcttgagggcttcggcctcatactggagaggaagagcagac
cgggaaagccttcagcgtgtttacggcatttcctatccagacaacaagctactgaaggag
tatcttcataacgtggaggaagctaagaaaagagaccatcggaagcttggccaacagcaa
gagcttttcttctttcacgaattgagccctgggagctgtttctttttacctcatggtgct
cggatatacaacaaattgcaagcttttatcagggatgagtaccgaaaaagaggttatgag
gaggtcgtttctccgaacatgttcaacatgcaactttgggaaacatccggacatgctgcg
aattacaaagacaacatgttcacatttgaggtggagaaacaagagtttggattgaagccc
atgaactgtcctggtcattgtctcatttttgatcatcgcgtccgttcatacagagaactt
ccgttgcgcttggcagattttggagtgcttcatcggaatgagttaagtggtgctctttct
ggactgacgagagtacgaaggttccaacaggatgacgcacacatattctgcatggagtct
cagcttctaactgaagtaaagggcgccttagactttctggagttcgcttacggagtgttt
ggtttcacatttgagctggagctttccacgagaccagagaaatacttgggtgagatagag
acatggaaccgagctgagaaagcattggaagctgccctgaatgcgtttggtaaaccctgg
cagattaatgaagcggatggtgccttttatggaccaaagattgacatcaccgtttttgat
gcattgaagagaaagtttcagtgtgctacaatccagcttgacttccagcttccgatacgt
ttcaacctatcatattccacggaagacgaagctaagagggaaaagccagttatcatccac
cgtgccattcttggatcggtagagcggatgttcgctattctgctggaacactatgcaggg
aaatggcctttttggctgagtccacgtcagtgtatcgtttgcccggtatcagagaaattc
acgcattatgcggtggaggttcgggatgctataaatgcagctggctatttttgtgaagca
gatgtcactgaccgtaaattgcagaagaagatccgagaagctcagttggcgcaatttaac
tacattcttgtcgttggcgaagaggaaacaagcaaaaaacaagtgaacatccgtacgcga
gataatgttgtgcatggcaccaagtctgttactgagttgctagcagattttcagaaagag
actgctgagtaccgctga
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