Physcomitrium patens (spreading earthmoss): 112273436
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Entry
112273436 CDS
T01041
Name
(RefSeq) ATP-dependent DNA helicase PIF1 isoform X1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppp03032
]
112273436
03029 Mitochondrial biogenesis [BR:
ppp03029
]
112273436
Enzymes [BR:
ppp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
112273436
DNA replication proteins [BR:
ppp03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
112273436
Mitochondrial biogenesis [BR:
ppp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
112273436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
Pif1_2B_dom
AAA_22
DEAD
PhoH
AAA_7
AAA_5
AAA_16
SLFN-g3_helicase
UvrD_C_2
ATPase
P-loop_TraG
nSTAND3
Herpes_Helicase
ResIII
UvrD-helicase
AAA_29
SEEK1
T2SSE
Mg_chelatase
NTPase_1
Motif
Other DBs
NCBI-GeneID:
112273436
NCBI-ProteinID:
XP_024357988
UniProt:
A0A2K1ITR8
LinkDB
All DBs
Position
20:1370966..1374341
Genome browser
AA seq
665 aa
AA seq
DB search
MVDVFALNDDDVGTGSCSQRQRDLSEAQKARMLQQKELALARLQARKLQQAQVPSRSGIH
TSLPEQASPNLLHGNPDPCRLPSQECNNYSTSLGPQFQNGVKFQVEGRGPQQIPRPLNST
ESLRHIPKEMEGDWISVRKRPAPGCSFGRRISPYFNQSNPSTEPEVYPIFKSHKTSPNVS
RSSQQSLGNSQSNVKRFHWQQQEPSVRLLKPEKSQNALNTASQKGKVVPSKQQMEVLKAI
TQQKSVFITGSAGTGKSFIIEDALRVLRQMYGEDAVFVTASTGLAACALGGITLHSFAGV
GIGSDTETKEQLLTKVRKRRDVKARWTKAQALVIDEISMIDGEFFDNLEYIASKIKGGSE
PWGGLQLIVTGDFYQLEPVKPSNPLKYFAFQAECWNRSFDIQVELTHVFRQLDMEFVNML
NEIRRGVCSPSTLHRLRQCQGPPDRADNGIEMTRLYPHQMDVRRENDQNLRCLGGDMIIY
RAKDDASTSFAQRQLDNVRAAAVQPLCVGAQVMLLKNLETAAGLVNGSRGVVVRFSAPDD
PASEEYVHLAKFINPTNQWPIVRFACDGLERLVGPVSWSVSDGNKEVAKRIQIPLMLAWA
LSVHKCQGMTLDYVETDLCKAFGHGMVYVALSRVKSLQGLRLIGFDPSRILTRPVVSKFY
EGLNK
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgtcttcgcactcaacgatgacgatgttggaacggggtcatgctcgcaaaga
caacgcgacctctcagaagcacaaaaggctcgcatgcttcagcagaaggagttggcgctg
gctcggttgcaagctaggaagctccaacaagcgcaggtaccctctcgtagtggcatccac
acgtctttgccagaacaggccagtcctaatctgctgcacggaaatcctgatccatgtcga
cttcccagtcaggaatgcaacaactattccacaagccttggaccgcagtttcaaaatgga
gtgaaatttcaggtcgaaggtcgaggtccacagcagattccacgcccattaaactcgaca
gagagcttgaggcatatcccaaaggagatggaaggagactggatatctgttcggaagaga
ccagctcctggttgcagcttcggcaggcggatttctccctatttcaatcagtccaatcct
tcaactgagcctgaggtctatccaatattcaaaagccacaagacttctccgaatgtgtca
cgttccagccaacagtcacttggcaacagtcagtcgaacgtcaagaggtttcactggcag
caacaagaaccgtcagtgaggttactgaagccagaaaaatcacagaatgctttgaatacg
gcatcacaaaagggtaaggtggttccctcgaaacagcagatggaagttttaaaggccatt
acccagcagaagtccgtctttattactggatctgctgggacggggaaatctttcattata
gaggatgcactacgcgtgttacgtcaaatgtatggagaggatgctgtctttgtgactgca
tccactggattagcagcttgtgctctaggaggaataacacttcattcgtttgccggggtt
ggcattggatccgacactgagactaaagagcaactcttaaccaaggtccggaagagaaga
gacgtcaaggctcggtggacaaaagcacaggctcttgttattgatgaaatcagtatgatc
gatggggagttctttgacaaccttgaatatattgctagtaaaattaagggagggtctgaa
ccgtggggagggcttcagttgattgtcaccggtgacttctatcaattggaacctgtcaag
cctagcaatcctctgaaatacttcgcgtttcaggccgagtgttggaatagaagttttgac
atacaggtggagttaacccacgtttttcgacagttggacatggagttcgtgaatatgctg
aatgagatacgtcggggagtatgttccccttcaactcttcatcgcttaaggcagtgccaa
ggtcctccagaccgtgctgataatggaattgaaatgacgaggttgtatcctcatcaaatg
gatgtccgccgtgaaaatgatcagaatctgagatgcttaggaggagatatgattatatac
agggctaaagatgatgcttcgacaagcttcgcacaaaggcaattggacaacgtgcgagca
gctgctgtacaacctctgtgtgtgggggctcaggtaatgctcttgaagaaccttgagacc
gcggctgggcttgtaaatgggtcgagaggtgtagtggttcgattttctgcaccagacgat
cctgcatcggaggagtacgtacacttggccaaattcatcaaccccactaaccagtggcca
attgtccgcttcgcttgtgatggccttgagagattagtgggccctgtaagctggagtgtc
tcagatggcaacaaagaggttgccaagagaatccagattcccttaatgctggcttgggcg
ctcagtgtacacaagtgccaagggatgacgttagactatgtggagaccgatctctgcaag
gcttttggtcatggtatggtatatgtggctctttcacgggttaagtctctgcagggcctt
cgcctcattggtttcgatccatccaggattttgacccgccctgtggtatccaaattttac
gaaggtctgaacaagtaa
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