Physcomitrium patens (spreading earthmoss): 112273492
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Entry
112273492 CDS
T01041
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai-like
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112273492
04131 Membrane trafficking [BR:
ppp04131
]
112273492
04121 Ubiquitin system [BR:
ppp04121
]
112273492
Enzymes [BR:
ppp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112273492
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
112273492
Membrane trafficking [BR:
ppp04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
112273492
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112273492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
112273492
NCBI-ProteinID:
XP_024358145
LinkDB
All DBs
Position
20:6129067..6132477
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AA seq
497 aa
AA seq
DB search
MVNLTIRLGKTGAGAGAIPGGKQEQAGGTIPKGPSVPPHLMGTDLPHLKGVGTVFSEPCA
MNFVGVKALRKPGDKVHICVRCDFPIAVYGRLIPCEHAFCLTCAKLYPTCFLCEERVTRI
QKMDVLEGIYICGAPGCLRSFLARPDFDLHISDAHSQLLQLEQGRLSPERNPSAANSLSE
TQVQSQHADVAPPVRQPSGTLQVLLPRKEPQRKPPKSVRQDPLGLLARPVPELRLPEEFP
HHRAGDQRTNSSKDGKTQGNDQKLLPRYREWEMHAPQGQGENERNTHEGESLRERRLDGG
SSNHSGRRKEREGDKGGPPPHPPPPPPSLPPPKKSHKQEQQQPIQQLPPPPPYPPPSFPP
AYLPQQEGNSFPSRFEAPRSFHSGMLYENGHQLRHPNGSIRPPEGYGQGGHRSMNGNSQE
QFGQNRPLRPHFHSDYSPPMGHLPPPGPPGPPGPHHKRPKLNEQGMDYSTWGPGTPGRFA
GPPPGYGYPNWMPPANS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatttaactatacgcctcggcaagaccggggctggagccggagccataccaggc
gggaagcaggagcaagccggcggtacaatccccaagggtccatctgttccgcctcatttg
atgggcacagacttaccgcatttgaaaggggtgggaaccgtcttttcggagccttgcgca
atgaacttcgtgggagtgaaagctcttcgcaaacctggggacaaagttcacatttgtgtg
cggtgcgatttcccgattgctgtttacggccggctgataccgtgcgaacatgcgttctgc
ttgacgtgcgccaaactttatccaacttgcttcctgtgtgaagaaagggttacacgtatt
caaaagatggacgtcctagaaggtatctatatctgtggtgccccaggttgtctgcgctct
ttccttgcaagacccgattttgacttgcacatctctgatgcccattcccagctcttgcaa
ctggagcagggaagattatcaccagaaagaaatccctctgctgcaaactcattatctgaa
actcaggttcagtcacaacatgctgatgttgccccccctgtacggcaaccctctggcacc
ctgcaggtgcttctcccacgaaaagaaccccagcgtaagccaccgaaaagtgttcggcaa
gaccctctgggtctactcgcgcggccagtccctgagcttcggctgccggaggagttccca
caccaccgcgccggcgaccagcgcacgaactcatctaaagacggtaaaacccaggggaac
gatcaaaagctgctgcccagatacagggagtgggagatgcatgctcctcaagggcaaggc
gagaatgagagaaacacccatgaaggggagtcactcagagagagacggttagatggaggc
tcctcgaatcattcaggacgaaggaaggaaagagagggcgacaagggcggcccccctcct
catcctcctcctcctcccccctcccttccacccccgaagaaatcacacaagcaggagcag
cagcaaccgatccagcaactgcctcctccacctccttaccctcccccaagctttcctccg
gcttatcttccccagcaagagggaaacagctttccttctcggtttgaggctccaaggagt
ttccactctggcatgctgtatgagaatggtcatcagttgaggcaccctaatggttctatt
agacctcctgagggttatggacagggaggtcacaggtccatgaatgggaatagccaagaa
caattcggtcaaaatagaccacttcgaccacatttccattcagattatagcccacccatg
ggccaccttcctcctccaggacctccaggacctccaggccctcatcacaagcggcccaag
ttgaatgagcaggggatggattacagcacctgggggcctgggactcctggccgctttgca
gggccgcctcctggctatggttacccgaattggatgccccctgcaaactcttga
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