Physcomitrium patens (spreading earthmoss): 112273873
Help
Entry
112273873 CDS
T01041
Name
(RefSeq) RNA pseudouridine synthase 2, chloroplastic
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppp03009
]
112273873
Enzymes [BR:
ppp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
112273873
Ribosome biogenesis [BR:
ppp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
112273873
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-GeneID:
112273873
NCBI-ProteinID:
XP_024358660
UniProt:
A0A2K1IQW8
LinkDB
All DBs
Position
21:complement(3572493..3576168)
Genome browser
AA seq
447 aa
AA seq
DB search
MLQALSKRHSMPICEGLVRCCVMEAAFAKELRMGFQSRCPRPLLHVNRCASFVSSAPSSA
SVARKVEAVGLEGGLDFKGTVPEGIGKTRLDAWLAGQLPLVSRARVQSNIRQGSILVNGK
AIIKGSYVLRPGDVVECELTGWAPVDANPEDIPLDIVYEDKHVIVINKPAHMVVHPAPGH
SEGTLVNALLHHCELPAMRYSSGSTPKNALESPSVDDSEEIDEEALVGTVTTLSGPPPVI
RPGIVHRLDKGTSGLLVVAKDEYTHAHLCDQFKARSVRRSYVSLTCGVPSLKSGRVEIPI
GRDPRDRKKMAAISASGSSAGRSKSRTAASRFRVLEVLANGGSALVEWRLETGRTHQIRV
HAQYLGYPLMGDDTYGGTQGAALSQLLPKTLAANHGSLRKLISGLQRPCLHAITLGFQHP
RTLEELDFKCAPPQDFESAWRTLRQTS
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaagcgttgtcaaagcggcacagcatgccaatctgcgagggtttggtgcgttgc
tgcgtcatggaggcagcctttgccaaggaattgcggatgggttttcagtctcgctgcccg
cggcccttgctgcatgtgaatcgctgcgcgtcattcgtttcatccgcgccttcctccgcc
tctgtggcgcgaaaggttgaggcggtgggtttggagggtggcctagactttaaagggact
gtgccggaagggattgggaagaccagattagatgcgtggttggcaggacaattgcccctg
gttagcagagcacgcgtccaaagcaacattcggcaaggctcaatcctcgtcaatggcaaa
gcgattatcaagggatcgtatgtattgcggccaggggatgtggtggagtgcgagcttacc
gggtgggcacctgtagatgcaaaccctgaagacattccactggatattgtatacgaagat
aagcatgtgatagtcatcaacaagccagcccacatggttgtgcatccggctcctggccat
tcagaggggacgttggtgaatgcccttctacaccattgtgaactgcctgcgatgagatac
tccagtggttcgacaccaaagaacgcgcttgagtctccgtctgtagatgattctgaagaa
atcgatgaggaagccttagttggtactgtaaccactctgtctggtcctcctcctgttatc
aggcctggaattgtacatcgtcttgataagggcacgagcggacttcttgttgtggccaag
gatgagtatacgcatgctcatttgtgcgaccaattcaaggcccgtagtgtgcgtcgctct
tatgtaagcctgacctgtggggtgccgtccttgaaatctggtagagtagagattcctatt
ggtcgggatcctcgtgatcggaaaaagatggcagcgatttctgcttctggaagtagcgca
ggtagatccaagtctcggacagcagcaagcaggttccgtgtgcttgaagttctagcgaat
ggtggatctgctttggtggaatggcggcttgaaacaggtcgaactcatcagatacgagtg
catgcccaatatcttggctatccattgatgggagatgatacatatgggggtactcagggt
gctgcattaagccaacttttaccaaaaacactggcagctaatcatggatctctgcggaaa
cttatttctggcttacagcggccatgtcttcatgctatcaccctaggatttcagcatccg
aggacgttagaggaactcgatttcaaatgtgcgccacctcaagactttgaatctgcatgg
cggactctgcgccaaacgtcttaa
DBGET
integrated database retrieval system
