Physcomitrium patens (spreading earthmoss): 112273964
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Entry
112273964 CDS
T01041
Name
(RefSeq) SAGA-associated factor 29 homolog A-like isoform X1
KO
K11364
SAGA-associated factor 29
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppp03021
]
112273964
03036 Chromosome and associated proteins [BR:
ppp03036
]
112273964
Transcription machinery [BR:
ppp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
112273964
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
112273964
SLIK complex
112273964
ADA-HAT complex
112273964
ATAC complex
112273964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SGF29_Tudor
Herpes_UL6
Tudor_3
DUF6200
APG6_N
CSD2
Tudor_5
Motif
Other DBs
NCBI-GeneID:
112273964
NCBI-ProteinID:
XP_024358837
LinkDB
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Position
21:complement(5042822..5046671)
Genome browser
AA seq
287 aa
AA seq
DB search
MCDSAGGDRELQQPKGVMAALELANAALKEIERLRKEQEQVIRKINNYHSKLQQSPEQAD
NMKEDSWFKLRQYYMKAKSLAEEEATVSSNCVEHLAGLLPGQAASNRKKPDSNEKKRKRV
RADDSTRLSSPTQRSTSAAYANLVPGDQVAARISSDGAENDEWIVVKLTKHDREANRFEV
IDEEPDDEGNGQSILRKYKLPPSQIIPFTKRSDVSNAPDFPVGSQVLAVYPGTTALYKAS
VVGPQRKKRSDEYSLEFDGDEEEGVAGLPTKIVPFYHVVQLPSGHRQ
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgacagcgctggtggtgatcgggagctgcagcagccaaagggggtgatggccgca
ctagagttggccaatgcggccttgaaggaaatcgagaggcttcgcaaagaacaggagcaa
gtcatacgcaaaattaacaattatcattccaagctccagcagtctcctgaacaagcggac
aatatgaaggaggattcctggtttaagctacgacaatactacatgaaggcgaagagcttg
gctgaggaagaagcaactgtttcctctaattgcgtggagcatcttgccggtctattacct
ggtcaagcggcatccaaccgcaagaaaccagattctaatgagaagaaacgaaagcgggtt
agagcagatgattctacacgactgtcgtctcccactcaacgaagtacgagtgctgcatat
gctaatttagtacctggagaccaggtagcagctcgtatctcaagcgatggtgcagaaaat
gatgagtggatcgtggtgaaattgacgaagcatgaccgggaagcaaacaggtttgaagtg
attgacgaagagcctgacgatgaaggaaatggccaaagcatactcaggaagtacaagctg
cctccttcacagattatcccttttacgaagaggtcagatgtgtccaacgcaccagatttt
cctgtaggaagccaagtgctggctgtttaccctggtacaactgcactatacaaagcatcg
gttgttggtcctcaacgcaagaaacgaagtgacgagtattctctggagtttgatggcgat
gaagaagaaggagtagctggcctcccaacaaagatcgtccccttctaccacgttgtgcaa
ttaccaagtgggcaccggcaatga
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