KEGG   Physcomitrium patens (spreading earthmoss): 112274048
Entry
112274048         CDS       T01041                                 
Name
(RefSeq) WD repeat-containing protein LWD1
  KO
K11805  DDB1- and CUL4-associated factor 7
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    112274048
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ppp04121]
    112274048
   03036 Chromosome and associated proteins [BR:ppp03036]
    112274048
Ubiquitin system [BR:ppp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     112274048
Chromosome and associated proteins [BR:ppp03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.3/1.5)
     112274048
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_1st Beta-prop_EIPR1 WD40_Gbeta WD40 WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WDR55 ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR41 Beta-prop_WDR3_2nd Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd MIOS_WD40
Other DBs
NCBI-GeneID: 112274048
NCBI-ProteinID: XP_024358957
LinkDB
Position
21:complement(13927064..13931163)
AA seq 338 aa
MASGEKIDQDAKRRGIFTYEAPWAVYGMNWSVRKNSKFRLAVGSFIEDYRNKVEIVQLDD
DSVNFSADPKLSFDHPYPATKIMFIPDKESEKPDLLATTGDNLRIWRIEEDKVELKSLLN
NRQNSDYCSPLTSLDWNESDLRRLGTSSIDTTCTIWDIESGVVDTQLIAHDKEVHDIAWG
GIGVFASVSADGSVRVFDLRDKQNSTIIYESPQPDSAPLLRLGWNKEDPRFMATILMDSS
KVVILDIRYPTVPVSELQRHLASVNAIAWAPHSACHICSAGDDSQALIWDMSAKAVDGGL
DPILAYTAGGEVNQLQWSASHSDWVAIAFGNKLQVLRV
NT seq 1017 nt   +upstreamnt  +downstreamnt
atggcgagtggcgaaaagatcgatcaggacgctaagcggagagggatttttacctacgag
gcgccatgggccgtctacggaatgaactggagcgtgcggaagaacagcaaatttcgtctt
gctgtaggaagcttcattgaggactacagaaacaaggtggagattgtgcaattggacgac
gatagtgtgaatttttctgccgatccaaagctctccttcgaccacccatacccggctaca
aaaatcatgttcatccccgacaaggagagcgagaagcccgacctattggcgaccacgggc
gacaatctccgcatttggcgaattgaagaggacaaagtggagctcaagagcttgctaaac
aatcgacagaacagcgactactgctctccgctcacctcgttagactggaacgaatccgac
ctccggaggctcgggacaagcagcatcgacacaacgtgcaccatctgggacatcgagtcg
ggcgtcgtggacacgcaacttattgcccacgacaaagaggtccacgacatcgcatggggc
gggatcggcgtctttgcatcggtatcagcggacggctccgttcgagtcttcgacctccga
gacaagcagaactccacgataatctacgaaagcccgcagccagattccgcacctctccta
cgcttgggatggaataaagaagaccctcgcttcatggcaacaatcctcatggactcgtcg
aaggtcgtgatactggacatcagataccctaccgtcccagtctcggagttacagcggcac
ctggctagcgtgaacgccatagcctgggctcctcacagcgcttgccacatttgctcggct
ggtgacgattcccaggctctgatttgggatatgtcagccaaggctgtcgatggaggattg
gatccaattctagcgtacacggcaggaggcgaggtcaatcaactacagtggtcggcgtca
cattccgattgggttgccatcgccttcggaaacaagctccaagttctccgagtgtaa

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