Physcomitrium patens (spreading earthmoss): 112274106
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Entry
112274106 CDS
T01041
Name
(RefSeq) nuclear poly(A) polymerase 1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112274106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112274106
Enzymes [BR:
ppp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
112274106
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
112274106
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
112274106
NCBI-ProteinID:
XP_024359040
UniProt:
A0A2K1IRD0
LinkDB
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Position
21:complement(6408701..6411552)
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AA seq
571 aa
AA seq
DB search
MDGDRYLGVTEPISTADPTEVDYANTKQLEEFVKGLALQGSREEEVRREEVLGLLDELVN
VWVKMVSRMKGLNDEYVREARCKIFTFGSYRLGVHGPGADIDTLCVGPCYVTREEDFFVE
LHDLLQKTDGVTELHTVPDAHVPVMSFEFNGIPIDLLYARLPLWVIPEELDILQDSILQN
VDEQSVRSLNGCRVTDRILRLVPNIEHFRTTLRYVKLWAKRRGVYSNVIGFLGGVNWALL
VARICQLYPNAVPSVLLSRFFRVYKQWRWPNPVMLCAIEEGSLGLPIWDPRKNPRDRSHL
MPIITPTYPCQNSSFNVSNSTLRVMTEEFKRGDGVCDSLDSKVADWSKLFEPYPFFESYK
NYLQIEITAGDEEDLRIWKGWVESRLRQLILKVEKDTFGMLQCHPHPNAFHDTSKKVQVC
SFFVALQRKQGAQHSSTPFDMCHTIAEFKHSVNQYLLWKPTMKIGVSHVRPKQIPTYVFP
NGIRPVRPPRPPLLSGRPGSGPNMDNVPTSLSPEASTRAVVTPPSDGKVSDGKESKEPEL
SIPDTKRGAESLGVLGGPHSKRVRVELRSES
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggacggggatcggtatttgggagtgaccgagccgatctcgacggccgacccgactgag
gtggactatgcgaacacaaagcaactggaggagtttgtgaaggggctggctctccagggg
agccgggaagaggaggtgcggcgggaggaggttctggggctgttggatgagctggtgaat
gtgtgggtgaagatggtgagtcggatgaaagggctgaacgacgagtatgtgagagaggcg
cggtgtaagattttcacgtttgggtcctatcggcttggcgtgcatgggccgggggccgat
atcgatacgctgtgtgttggaccctgctatgtgacgcgtgaggaggatttcttcgtggaa
ttgcatgatttattgcagaagacggacggagtcaccgagctgcacaccgtgccggacgct
catgtgcctgtcatgagttttgaattcaatgggatccctattgatctattgtacgcacgc
ctgcccttgtgggtcatccctgaggaattggacattctgcaagatagcatcttgcagaac
gtggacgagcagagcgtgcggagtttgaatgggtgccgggttacggatcggattctgcgc
ctggtgcctaatatagagcattttcggactactctgaggtatgtcaagctgtgggccaag
aggcgaggggtgtattccaatgtcatcgggtttctgggaggtgttaactgggctttgctt
gtggctcgcatttgccaattataccctaacgctgtgccgagcgtgctgttgtcgaggttc
tttcgagtctacaagcagtggcgctggcctaacccagtgatgctctgtgcaatcgaggag
ggttctctcggtcttcccatctgggatccacgcaagaaccccagagacaggtcgcacttg
atgcccatcataacccccacgtatccctgtcaaaattcaagtttcaacgtctccaacagc
actttgcgggtgatgacggaggagtttaagcgtggggatggcgtttgtgactctttggac
tccaaagtggcagattggagtaagttgtttgaaccataccccttctttgaaagttacaaa
aactacctacaaatcgagattactgcaggagacgaggaagatcttagaatctggaaaggc
tgggtagaatcgcggcttagacagctcattctcaaagtggagaaagacaccttcggtatg
cttcagtgtcatccacaccccaatgcttttcatgacacaagtaagaaagttcaggtttgt
tctttctttgtggctttgcaacgtaagcaaggtgctcaacactcttcaactccatttgac
atgtgtcacacaatagctgaattcaaacactcagttaatcagtacttattgtggaagccg
acgatgaaaatcggtgtgtcgcatgtccgaccgaagcagataccgacctatgtctttcca
aatgggatccgtccagtacggcctccaaggcccccgctcctgagtgggcgaccagggtcc
gggcctaacatggataacgtaccgacttctctgtccccggaagcgagcacaagggctgtt
gtgaccccaccgagtgacggaaaggtctccgatggaaaagaaagtaaagagcctgagctc
tcgattcccgacaccaagaggggtgccgagagtctcggggtacttggaggaccccattcg
aaaagggttagggttgagctcaggtctgagagttga
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