Physcomitrium patens (spreading earthmoss): 112274272
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Entry
112274272 CDS
T01041
Name
(RefSeq) nuclear pore complex protein NUP133 isoform X1
KO
K14300
nuclear pore complex protein Nup133
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112274272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112274272
03036 Chromosome and associated proteins [BR:
ppp03036
]
112274272
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112274272
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
112274272
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
112274272
NCBI-ProteinID:
XP_024359361
UniProt:
A0A2K1IRY4
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Position
21:complement(9107225..9112980)
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AA seq
1248 aa
AA seq
DB search
MFTPGRARKPASRVKERESYGGGEVAATPKSVVPLPYVAPSRALPSPWPSPAPNAARPSP
APTVPRASVVRNSDKAATADGNHPVFVCDLPQQLLSSHGDATFATQPEGAVLQGGMDQGS
GLSWILQGNQLYVWNNLRSSQRCVLDMPPLGTISTEEKWFVSLVPHWTDENLEVQYKGCS
AVSVVMCSSKSLALVYWSDAFSNGDKPAITSMDSEDTSMLDDGSRSSRRASGGWTEGSGT
SEVTSIQASATGSQTTCVAIVSRADGELWRFDCCADGVSRERISRDATSSEVGYSIFLSE
TCSVRRIVWRSPPRGASREFLLLTSQSIECWEVELTLRGNVSKSWVYELSNDKDVMSDFS
GQKQVWLLDLQVDEEGEQLVMLTASFSSGSTTYMQYLLHYFSCSSKREPKRKAPPQIILP
KAQVEEESFFYSMRLRIGGQPAGSVVILAEDGTATVAHVGRSGAVHLYKFEIVGGDGKVL
DASVVPADDGGAWIVLTEQAGVWAIPAKVVLAGRVEPSERNLANHEISYPSINDDRSQHV
SGEALALQRSSSEAAVGDNPDHGMISRPSQDEEAEAIVGRLFQQFLSSGQANEAFEKLLR
AGAFERDGDKNVFARSSRALVDTFAKHWASGGGSGLAMVATVSSQLAEKQRRHQQYLNFL
AVSKCHVELQNNLRAALNEILEHGEKLASMVALRELNNSRAQLKPASPTMLSQFNGGDMS
GAIWDLVQLVGDKARRNNVVLMDRDKMEVFYTRVSGLEDFFWCIQQHAAFLVQRDQAVRV
QIERACELANACRTILQVAISYRDTQQAWYPSPEGITPWHCKQNVRSGLWKIATMLLELK
VEGDMSEPTLTAEVMRQVEEIADFLLEGYAGAITAKVEREEEYRGLQMEYWTRRDLLLTA
LQQHAFQVATQNAGRGENAEQQRLSILQKLYAPLIALARRHAAFPSLLQMCTDLDDQKRL
RTLMKESMGLKEGRFSRFVFDQCYQQGQYARLLRFGEEFGEEVSAYLEQHPLLLWLHELF
LCRFTRASGTLHTLAFSQKSAPLNISHRRRLLQLAKLSALAGGAVGAEEEVSRLEADMDI
LAVQEVATKLGVLGEDVVQPVQLVEACLNSGSRELTLCAFRVFTSAGSKFCSGNYSLLEQ
AWLRAVDQDDWLGMKRTSEEEGWTEDHTMQVIQDSLLYQASRHCYGESHLSNFARDVSTE
SVEKVIAKHPSYSEAGQAMVTAFRLGFYFGSDLPDGSQDGDSEQMVEI
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgttcacgccaggacgtgcaaggaaaccggcaagtcgagtgaaggagagggagagctac
gggggaggagaggttgccgcgacgccgaaatcggtagtgccgctgccttatgttgctccc
tcgcgtgctctgccatcgccgtggccctcacctgctcccaatgctgccagaccctcacct
gcccctactgttcccagggctagtgttgttcgaaatagcgacaaagctgcaactgccgat
ggcaaccacccagtgtttgtgtgcgacttgcctcagcagctgctcagttcccatggcgac
gcgacttttgccactcagccagaaggggctgtattacaaggtggaatggaccaagggagt
ggattgtcatggattctgcaaggaaaccagttatatgtttggaataaccttcgcagtagc
cagaggtgtgtcttggacatgccaccactgggaacgataagcacagaagagaagtggttc
gtttctctggtaccacattggacagatgaaaacttggaggtacagtacaagggttgtagt
gcagtgagtgtggttatgtgttccagtaaatcactagcgttggtttactggtctgatgct
ttttcaaatggagacaaaccagcaatcacaagcatggattccgaagacacttcaatgctg
gatgatggcagccgaagtagccgcagggcatctggcggctggacagaaggttcaggtact
tcagaagtcacatctatccaagcatcagcaacaggcagtcaaactacttgtgtggccatt
gtgagccgagctgacggagagctctggagatttgactgttgtgccgatggtgtatcacgg
gagaggatatcacgtgatgcaacatcaagtgaagtaggatacagcatatttttgtcggag
acctgcagtgtgaggagaattgtttggcggtcaccacctcggggcgcatctcgtgaattt
ttgctattgacgtctcaaagtattgaatgctgggaagtggaactcactttaagagggaat
gtttccaagtcttgggtctatgaactttcgaatgataaagacgttatgtcggacttttct
ggacagaaacaagtttggctgctcgacttacaggtggatgaagaaggggagcagttagtg
atgttaacggcgtcatttagcagtgggagtacaacctacatgcaatatctccttcattat
tttagttgttccagtaaaagagaacctaaacgcaaagcacctcctcaaatcattcttcct
aaggcccaagtggaagaagaatcatttttttactcaatgcgtttacggataggagggcag
ccggcagggtctgtcgtcattcttgctgaggatgggacagccacggtcgctcatgtaggt
cgaagtggtgctgtccatttgtataagtttgaaatagtcggtggagatgggaaggtattg
gatgcgtctgtagtccctgctgatgacggaggtgcatggatagtgctcacagagcaggct
ggtgtttgggccattccagccaaggtagttttggcaggaagggtggagccctctgagagg
aatcttgctaatcatgaaattagctacccctcgatcaacgacgaccgatcccaacatgtt
tcaggtgaagccttggcgctgcaacgatcgagctctgaggctgctgtaggcgacaatccg
gatcacggcatgatttctcggccttcgcaagatgaagaagcagaagctattgtgggacga
ttatttcagcaattcctatcctctgggcaagcgaacgaagcttttgaaaagctgctgcgt
gcaggagcatttgaaagggatggcgacaagaatgtctttgctcgttctagtcgggcacta
gttgatacatttgcaaagcattgggcatctggaggtggatctggattggctatggttgcc
actgtatcatcgcagcttgctgagaagcagagaaggcaccagcaatatctgaattttctt
gcagtgtccaagtgtcacgtggaacttcagaacaatctgagagcggctctcaatgaaatt
ttggagcatggggagaagctggcaagtatggtagccctcagagagttaaataattctcgt
gcccagctaaaacctgcatcccctacaatgctatcgcagtttaatggtggggatatgagt
ggagccatatgggacttagtacagcttgtgggagacaaggcgcgaagaaataacgttgtt
ctcatggaccgggacaaaatggaggtcttctatacaagggtgtccgggctagaagatttt
ttttggtgcatacagcagcatgctgcttttctagtccagcgtgaccaagcagtaagagtc
cagatcgagcgtgcatgtgagcttgctaatgcctgtagaacaattctacaggttgctata
tcttaccgggatactcaacaagcatggtatccttcacctgagggcattaccccttggcac
tgcaagcagaatgttcgttctggtttgtggaagattgcgactatgctattagagctcaag
gtggagggagacatgagtgaaccaacattgacagcggaggtgatgagacaggtagaagaa
attgcagactttctattggaaggctatgctggtgctattactgccaaagtggaacgggaa
gaggagtaccggggactgcagatggagtattggacccgcagggaccttcttctcaccgct
cttcaacaacatgcttttcaagttgcaacacagaacgctggaaggggtgaaaacgccgaa
caacaaagactcagtattttgcagaagctatatgcgccacttatagcgctcgctcggcgc
catgcagcctttcccagcctccttcaaatgtgcaccgacctcgacgaccagaagcgcttg
cgtaccctcatgaaagaaagcatggggctaaaggaaggtcgttttagtcgcttcgtgttt
gatcaatgctatcaacaaggtcaatatgcccgtctacttcgttttggggaagaatttgga
gaggaggtttcggcctacctcgagcaacaccctcttcttttatggttgcatgagctattt
ctgtgcagatttactcgagcatctggcacgttgcataccttggccttctctcaaaagtct
gcacctcttaacatcagccatcgacggaggctcttgcaacttgcaaagctgtctgcactg
gcaggaggggcagtaggagcagaggaagaagttagtcgtttggaagcagatatggatatc
cttgcagtacaggaagtggcgacaaaattgggagtacttggggaggatgtcgttcaacca
gttcagttagtggaggcttgtttgaatagtggctccagggagctaacattgtgtgcattt
cgggtgttcacaagtgctggttccaaattttgcagtggaaattatagcctgctggaacaa
gcctggctgcgagcagttgaccaggatgattggttgggcatgaagcggacttcggaggag
gagggttggactgaagatcatactatgcaagttatacaggattcacttctctaccaggcc
tctaggcactgttatggagaatcgcatttgagcaattttgctagagatgtgagtacagaa
tcagttgagaaagtgatagcaaagcatccaagctactcggaagctggacaggcgatggtc
acggcgtttaggttaggcttttattttggcagtgatctgccagatggatcgcaagacgga
gatagtgagcaaatggttgaaatataa
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