Physcomitrium patens (spreading earthmoss): 112274312
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Entry
112274312 CDS
T01041
Name
(RefSeq) light-mediated development protein DET1
KO
K10571
de-etiolated-1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112274312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112274312
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112274312
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
112274312
NCBI-ProteinID:
XP_024359454
LinkDB
All DBs
Position
21:6706127..6711177
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AA seq
882 aa
AA seq
DB search
MWKQSENIVHRLFSRQVSSGRPNTTIHRARELYENVVPSHTVYEVDCPDQWWRRFTHDGQ
YLICFSKAQQDLLIYRPLWPTYCSTSDTINDLPSKSKEFESYFSLLHQVPLARGPNEVIC
KDFFLSTENNLYGIFATSTAPDTNAAATNGAVPGVPCIEKITFLVVRFADGSITGRSVFK
DDYIHLAHNAGVFLHDDLLAVLSIRFQRIHILQVRDGGLFLDVRTIGDFCRDDDELILNS
QAQAEAKFQEEQRLLRKARGRLDEAEILASVSQSGTTRGKPWTTLIDRKRPRLRDSRASH
EDFGSAPAYSHYLGAANGVSHGDVIDVAHEGYFRGLGTGRDGPAADLSTPSGNGNMRILT
GGEYDSHANGNLHIRRFRLGVDSASHSNGYNHVRSFPVGRETGIPSSLQVRRLAPERDNR
NYEPPSGRRFGAEVLNGSRENLSGRQFSSERGATHETSTFRLFGNYLSLSGSLFSSSGTD
VVSHSEPGSSDGTALNEFSSHRDDAGTSERWIRPVSSVSIHGGSIVLPQNRSDSVIRDEP
SLGDASVGPSRTSLERVEQTTTSTEISTGRLGQPGPSNSSISHGSGGLGSMRGGATQSEY
EAAASMSVDGVPDGRQMLRGLKQRLLSFILQGIHNEVTTPAVKAQQLKRFYYYFQDYMNL
VMWKVQFLDRYHLLIKFGSVDGVILRNSEVSHQNSFFAVYNMETTEILAFYPNSSEELLQ
LVEHYWDHFRVVPQSPLYMNFISSYSNNIFAREQLRKQKAACISGKIGSYAQVIKRTLAS
LPHNSQSLSPSAYFDQYLFHFDEKLISSTDRHKPCAEHPIKFISRRRPNTLKFKINPGLE
LGSNDGHIKRVASFLFHPIFPFVISVQQSFMQTSIVNFHFRR
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagcagagtgagaacattgtgcatcggcttttctcccgacaagtcagctccggc
cgtcccaacacaactatacatagggcacgagagttatatgagaatgtcgtaccgagccac
acggtctatgaggtagactgtccagaccaatggtggcgtcggtttacccacgacgggcag
tacttgatctgtttcagtaaggcgcaacaagacttgctcatctaccggcctctgtggcca
acgtattgttctacttcagatacgattaatgatctcccttcgaagtccaaggagttcgag
agttatttcagcttgctgcatcaggtccctctcgctcggggtcccaatgaggttatctgc
aaggactttttcctgtctacggaaaacaatttgtatggcatatttgccacatcaactgcc
ccagatactaatgctgcagcaacgaacggtgctgtgcctggagttccctgtattgagaag
ataacattcctcgtggtccgctttgctgatgggtccatcacgggacggtccgtcttcaaa
gatgactacatacacctggctcacaatgctggtgtatttttgcatgatgacctcctggcc
gtgttgtctattcgcttccagcgtattcatattcttcaggtccgagatggtggactcttc
ttggatgtgcgcactattggcgatttctgtcgagatgacgatgagctcattctcaattca
caggctcaggcagaggctaaatttcaggaggagcagcgactgctgcggaaagctcgaggc
cgtcttgacgaagctgagattttggcttcagtctctcagtctggtactacccggggaaag
ccttggactactttgatcgacagaaagcggccacgacttcgagatagcagggcctcacat
gaagattttggttcagccccggcgtactcgcactatctgggtgcggcaaatggtgtgagt
cacggtgatgtgattgacgttgctcacgaagggtatttccgagggctcggcacaggtaga
gatggacctgctgcggacctgagcacgccaagtggcaacggtaatatgaggatccttact
ggtggagagtacgatagtcatgcgaatggcaatcttcacattcgtcggtttcgattagga
gtggactcggccagtcattcaaatggctataatcacgttcgctcgtttcctgtggggagg
gagactgggattcctagtagtttgcaggtgcgtcgtttggcccccgaaagagacaatcgc
aactacgaaccaccgtctggacgacggtttggagctgaagtactgaacggtagccgtgag
aatctatcaggacgtcagttttcctcagagaggggcgctacgcatgaaacctcaactttt
cgtttgtttgggaactatttgtctttaagtggaagtttgtttagtagtagtggtactgat
gtagtgagccatagtgagccgggatcttctgatgggactgccctcaatgagttctctagt
cacagagatgacgcaggaaccagtgaaaggtggatacgaccagtgtccagtgtgtccata
cacggggggtcgatcgtgcttcctcagaatcgttcagattctgtaatccgtgacgagccc
agcctgggtgacgcttctgtgggaccttcacggactagtttggagcgtgtggagcagacg
accactagcacagaaatttctactggtagactagggcaaccaggtccaagtaattcaagt
atttcacatggttctggtggacttgggagtatgaggggaggtgctacacaatctgagtat
gaagctgccgcaagcatgtctgtggacggagttccggatggaaggcagatgttacgtgga
ctcaagcagcggcttttgtcgtttatcttgcagggtattcacaatgaggtcacaactcct
gctgttaaagctcaacaacttaagcgcttctattattatttccaagactatatgaatctg
gtgatgtggaaggtgcaatttcttgatcgatatcacctgcttataaaatttggtagtgtg
gacggagtgatactaagaaattcagaagtatcgcatcaaaactcgttttttgctgtatac
aatatggaaactacggagatacttgctttttatccgaattcatcagaggagttgcttcag
ttggtggagcattactgggaccacttcagagtggtcccacagagtcctttgtacatgaat
tttatctccagctattcaaacaacatcttcgcccgcgagcagttgcgtaagcagaaagct
gcatgtatttctggcaaaatcggtagctatgcacaggtcatcaaaagaactttggcctct
ttaccgcacaactctcaatctctaagtccatctgcctattttgatcagtacctgtttcac
ttcgatgagaagttgatatcttccaccgataggcacaaaccttgtgcggagcatccgatt
aagttcatttctcgtcgtcgacctaatacacttaaatttaaaatcaaccctgggttggag
cttggttcaaacgatggccacataaagcgagtagcttcttttttgttccaccctattttt
cccttcgtcatctctgtccaacagtcatttatgcaaacctctattgtgaacttccacttt
aggcgttga
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