Physcomitrium patens (spreading earthmoss): 112274313
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Entry
112274313 CDS
T01041
Name
(RefSeq) protein PIR isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112274313
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112274313
Factors involved in mRNA localization
Other mRNA localization factors
112274313
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cas_Csn2
GlgX_C
Binary_toxB_2
Motif
Other DBs
NCBI-GeneID:
112274313
NCBI-ProteinID:
XP_073385954
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Position
21:5196781..5209248
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AA seq
1305 aa
AA seq
DB search
MAVPVEEAVAALATFSLEDDQPDIQGLAVTLVGGRSSTESPLDYEDVPAYQLSLAEDTVA
ITQLDTLVMEGRDLVAVLYSYRSCVKALPQLPESMKQSQGDLYLETYQVLDVEIGRLRGM
QRWQAAASTKLASDMHKFSRSDKKVKGPTVTHMWGMLRLLDVLLQLDHLKNAKASIPNDF
SWYKRTFTQISTQWPDTDGMREELDDLQIFLSTRWTILLNLQAEVFRVNGVEDVLQVLIL
FCLESLESDRVLLYSERHCLLRVLPVLVVLATSGEKEGESFFKRIKLPRLIRIFRGDPVI
PAFPDLHLAPASILKELAPYFQKVSAQVRQIGVPLPHELSPREASEYQREYLIVNHMVTI
RSQHDEYALRFAAALNQLQLMKMAKDADSTESTHVKEDMYLVIVEGFQLLSEWTGRIWEQ
SAWKFSRPAKDATPFDPERSNEVTDYEKVVRCNYTPLERKALVELISYIKGVGTMMERVD
TLVADSIWEVLHAQVQEFVQNKLAIMLRTTFKKKKEMSRILNDMRIIAADWMGNTSHLAG
QASRLREEGVGVPVTFRTRPAAPTAGQLHCLQYLIHELVSGGSPKQSGGFFTGNDVDIPA
GDMRQLENFFNRLAFFPHILDYRATLANLTDLGFLWFREFYLETSRVIQFPIECSLPWML
VEYVIESKEGGLLESILMPFDVYNDAADHALRALKQRFLYDEIEAEVDLCFDQLVYKLSE
NIFGYYKSRAASDMLDLSFLAVVDNREKYKVPPKRYDLLFRIRRVKLLGRSIDLAFLIGQ
RMNKIFRENLDFLFERFEAHDLCSIVDLQRLVDILRLTHELLSEHVKMDPFPLMMGEMTE
TISLVSFSGRVATQVYTELQNDFFPNFILCTTTQRFVRSSVKYQRQVRRPPNPQADPIFL
CGTSDLNVAHGHMAELYNNFFGLPHMFALVKLLGSRSLPWLVRALLDNLSQKITNMEPGI
EELRNSMPKAIAIPSHDWGVEGCLRNFLEQLQWTRTYDGFSDMLLNLKEIGSLIFWMSLL
DTAMRQVETVHFMQVVPWLGVVPNKEGQLQQLLADDNFSPLVSIFKQASDEVVSNLGCMN
PNAFVSMAKQAQVADILYMNNLQTGSILDYTLAYLGAVLARVRDKWDQPSKSGLIEITTS
REYYRIYSSFQFLNLQGFSPGLQATSPQVQNQQPPIEGENFEERYGDGVAWGGCTIVYLL
GQETRFELLDFTYHVLAVAESDTLSTSLAYIEMMAKGTTSYPVEVTSFLENARRARRLNS
HVFSLLRARAPQEDKLSSMIKPNGTLVHRIKYPVTPSVYVTLPKV
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcctgtggaggaggctgtggcagcccttgctaccttctcccttgaggatgac
cagcctgacatccaaggacttgctgtcactctagttggtggtcgcagcagtacagaaagt
ccattagactatgaggacgtgccagcataccagctctcacttgctgaggatacagttgca
attacccagttggatactctcgttatggagggacgtgatcttgtggctgtcctatactcc
taccggagctgtgttaaagctttgccgcaactaccagagtccatgaagcaaagtcaagga
gacttgtacctggaaacgtatcaggtgctggatgtagaaattggtcgtcttcgtggaatg
cagcgatggcaagctgctgcttccactaagctcgccagcgatatgcataaattctcgcga
tctgacaagaaagtcaagggtcctacagtcacgcacatgtggggcatgttgaggctgctt
gatgtgcttttgcagctggatcaccttaagaatgcgaaggccagcattccgaacgacttt
tcttggtacaagagaacgttcacccaaatcagcacgcaatggcctgacaccgatgggatg
cgtgaagaacttgatgatttgcagatttttctcagtacgagatggacaatactcctgaac
ttacaagcagaggtgtttcgggtaaatggtgtggaggacgttttgcaagtcctcattctg
ttttgcctcgagtctctggaatcggatcgtgttttactttattccgagcggcattgtctc
cttcgtgtgctgcccgtcttggtggttcttgccacatctggagaaaaagaaggagaatcg
ttctttaagagaatcaagcttcctcgacttatacgcatctttaggggggatccagttatt
cctgcgtttccggacctgcatctagcccctgcaagcattctcaaagaactagctccatac
ttccagaaagtttcagcccaggttcgacaaattggggttcctttgccacatgaactaagc
ccccgagaagcttcagagtaccagagggagtaccttattgtaaatcatatggtgacgatt
agatctcagcatgatgagtatgccttgagatttgccgctgccttgaaccagctgcaactg
atgaaaatggcgaaggatgcagattcaacagaaagtacgcatgtaaaggaagatatgtat
ctggttatagttgaaggctttcaattgttgagtgagtggacagggcgaatatgggaacag
agtgcttggaaattttctcgacccgctaaagacgcaaccccatttgatcctgagagatcg
aatgaagtgactgattatgagaaggtggtgcgttgcaattacacacctctggaaaggaag
gctttggtggagctgataagttatataaaaggtgtgggtactatgatggagagagtcgat
actctcgtggccgactcaatttgggaggttttgcatgctcaagttcaggagtttgttcaa
aataaactcgctatcatgctccgcaccactttcaagaaaaagaaggagatgtctagaata
ctgaatgatatgagaataattgctgctgattggatgggaaacacaagtcacctagctgga
caggcttcaagattgagagaagaaggtgttggagtcccggttacttttcggacgcgacca
gctgctccaactgctggacagcttcattgtttgcagtatttgatccacgagctcgtatct
ggaggcagtccaaaacagtcaggcggctttttcacgggaaatgatgttgatattccggca
ggggacatgagacagctggagaattttttcaacagactggctttcttcccccatatacta
gactatcgagctacacttgcgaacttgaccgacctgggatttctttggtttcgagagttt
tatctggagacttcacgtgttatccagtttccaatcgagtgctcgttgccgtggatgttg
gtggagtatgtaatcgagtcaaaagagggaggcttgctggagagtattcttatgcccttc
gacgtctataatgatgcagcagatcatgcacttcgtgccttgaagcagcgattcctctat
gatgaaattgaagctgaggtagatctatgttttgatcaattagtgtacaagttgagtgag
aacatctttggttactacaaatcccgggcagcaagcgatatgctggatctttcatttctt
gcagttgtagataatcgagaaaagtataaggttcctccaaagcgttacgatcttcttttt
agaattcggcgtgtgaagcttctggggcgcagcatcgatttggcattccttatcggccaa
cgtatgaataaaattttccgggaaaaccttgattttttgttcgagagatttgaagcacat
gatctctgctctattgtggatcttcaaaggcttgtggacattttgagacttacgcacgag
cttctctcagagcatgttaagatggatccattccctttgatgatgggagagatgactgag
accatttctctagtatctttttcaggacgtgtggctactcaggtgtacaccgagctccag
aacgacttctttccaaattttattttatgcactacaactcagcgttttgtcagatcttct
gtgaaataccaacgacaagtccggagaccaccaaatccacaggctgatcccattttcctt
tgtgggacttcagatttgaatgtggctcacggtcacatggcagaactgtacaacaatttt
tttggattaccgcacatgtttgcacttgtcaaattattgggatcgagatcacttccatgg
cttgtccgggctttgctggataatctatcacaaaagattacaaatatggagcctgggata
gaggagttgcgcaacagcatgccgaaagctatcgctatcccttctcatgattggggcgtt
gaaggatgtttaaggaattttttggagcagctacaatggacacgtacatacgatggtttc
agtgacatgctactgaatttgaaagaaataggaagcctaattttttggatgagtcttctt
gatactgctatgaggcaagttgaaacagttcacttcatgcaagtagttccatggttgggt
gttgttcccaataaagagggccagttgcaacagttgctagctgatgataatttcagtcct
ttggttagcatcttcaagcaagcttccgatgaagttgtttcaaatttaggttgtatgaac
cccaacgcttttgtatccatggcaaagcaggcacaagtggcagacattttgtatatgaat
aatttgcaaaccggtagcatactggattacacgcttgcataccttggagctgtgcttgcc
agagtcagggataaatgggatcagccatccaagtccggtttaattgaaatcacaacatcc
agagagtactatcgaatatatagcagctttcagtttctcaacttgcaaggattttctcca
ggcctacaagcaacatctcctcaggttcagaatcagcagcctccaatcgaaggtgagaat
tttgaagaacgatatggtgacggagttgcgtgggggggctgcacaattgtctatcttctg
ggtcaagaaactcgatttgagcttctcgacttcacttaccacgtacttgctgtggccgag
tcggatacattgtcgacgtccctggcttatattgaaatgatggccaaggggacgacctca
tatcccgttgaagtaacctcatttttggagaatgctcgaagagcgcggagattaaatagt
cacgttttctcattgctacgggcacgggctccccaagaggacaagctttcatcaatgatt
aagccaaatggcacattggtgcatcggatcaagtatcccgtcacaccgtcagtgtatgtc
actttgcctaaggtgtag
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