Physcomitrium patens (spreading earthmoss): 112274407
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Entry
112274407 CDS
T01041
Name
(RefSeq) ubiquitin receptor RAD23c
KO
K10839
UV excision repair protein RAD23
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03420
Nucleotide excision repair
ppp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112274407
09124 Replication and repair
03420 Nucleotide excision repair
112274407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ppp03051
]
112274407
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112274407
Proteasome [BR:
ppp03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
112274407
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
112274407
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
UBA_Ucp12
UBA_RAD5A
UBA_3
Motif
Other DBs
NCBI-GeneID:
112274407
NCBI-ProteinID:
XP_024359642
UniProt:
A0A2K1IQ61
LinkDB
All DBs
Position
21:complement(172760..177360)
Genome browser
AA seq
393 aa
AA seq
DB search
MKISVKTLKGNHFDLHVAEDELVSSVKRKIEELQGKDAFPCAQQLLIHQGKVLKDETTMA
DNKVAENGFLVVMLTKTKATPAPAGGAPASSSGPVQAPAAPAPAPAPAPASTSTPAPAAP
APAPAAVAATPGAGAPAGTGDGYGQAASNLVAGSALESTVQQIMDMGGGTWDRDTVLRAL
RAAFNNPERAVEYLYSGIPEAAEVPAPVARGPPAGGAPVAAAPAGPGAAGAAAVAANPQG
PNAAPLDLFPQGMPGAGGGGAGLGALDFLRNNPQFQALRTMVQANPQILQPMLQELGKQN
PALLRLINENQAEFLRLINEAGAEGAEGGDAVGRLAGGYPQSVNVTPEERESIERLEAMG
FNRALVIEAFLACDKNEQLAANYLLEHANDEDL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaagatctccgtgaagactctgaaggggaaccactttgatctgcacgtcgcggaagac
gagctggtcagctccgtgaagaggaagatagaagagttgcaaggaaaggatgccttccct
tgcgcgcagcaacttctcattcatcaagggaaagttctgaaagacgagacaaccatggct
gataacaaggtggcagagaatggcttcctcgttgtgatgttgacaaagacgaaagcaaca
ccggcaccagcaggtggcgcacccgcgtcgtcgtcgggacctgtccaggctcctgcagca
cccgctccagctccagctccagctcctgcatcaacgtccacgccagcgccagcggcacct
gctccggctccggctgcggtggcagcaaccccgggtgcaggagctccagcaggcacggga
gatggatatggtcaggctgcatcaaaccttgtcgcagggtctgctcttgagtcaacagtg
cagcaaattatggacatggggggaggaacgtgggatcgcgacactgttctacgcgcattg
cgagctgctttcaacaaccccgagagagccgtggagtatctttactctgggatacctgaa
gctgcggaagttccagctcctgtagcgcgcggtcctcctgcgggcggagcacctgtcgcg
gcggcgccagcaggccctggtgccgcaggcgcagcggcagtagcagcgaatcctcaagga
ccaaatgccgcccctctggatctgtttcctcagggcatgccgggcgcaggcggaggaggt
gctgggttaggagcattggattttctgcggaacaacccacagtttcaagcgttgaggacc
atggtgcaagccaaccctcagattttgcagcctatgttacaagaactggggaaacaaaat
cccgctctgctgcggctgattaatgaaaaccaggcggagtttttgcggctgatcaatgag
gcgggcgctgaaggcgcggaaggaggggatgctgtggggcggctggcaggaggatatccg
cagtctgtgaacgtgacccctgaagagagagagtccattgaacggttggaggccatggga
ttcaatcgagcgcttgtaatcgaggcattccttgcgtgcgataagaacgagcaattagct
gcgaactacctcctagaacacgcaaatgatgaggatttgtag
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