Physcomitrium patens (spreading earthmoss): 112274430
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Entry
112274430 CDS
T01041
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00900
Terpenoid backbone biosynthesis
ppp01100
Metabolic pathways
ppp01110
Biosynthesis of secondary metabolites
Module
ppp_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
112274430
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ppp01006
]
112274430
Enzymes [BR:
ppp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
112274430
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
112274430
2.5.1.29 geranylgeranyl diphosphate synthase
112274430
Prenyltransferases [BR:
ppp01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
112274430
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Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
112274430
NCBI-ProteinID:
XP_024359701
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All DBs
Position
21:9365362..9367776
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AA seq
387 aa
AA seq
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MGSTVVSYSSQCVGLAAPTNIVARVSGADLDRISGRTHMSTQFYGVRSGALGAKGWVRSS
TRICTRIPVLIIKARVVNEVEDIFPDAVSKSLEFDLDSYLRAKAKAVNVALDKAVPMQYP
EKIREAMRYSLLAGGKRVRPALCIAACELVGGNEDLAMPSACAMEMVHTMSLIHDDLPCM
DDDDLRRGKPTNHKAFGEDTAVLAGDALLAYAFEHIARATTGVPADRVLRVIAHLGKAVG
SEGLVAGQIVDIASEGDRTVGLEILEYVHTHKTAVLLESAVVSGAILGGASEDEISRLSN
YARNVGLLFQVVDDILDVTKSSAELGKTAGKDLVADKATYPKLLGLEKSRAFAEELIRKA
KDQLSVFDQQKVAPLLGLADYIAYRQN
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaacagtggtctcatacagttcgcagtgtgtcgggttggcagcacccacgaac
attgttgcccgtgtgagtggcgcggatttggacagaatttctgggcggacccatatgagc
acccaattctatggtgtgcgctctggagctctgggtgccaagggctgggtgcggtcctcg
accaggatttgcacacgaatcccggtgttgattattaaggcccgcgtcgttaatgaagtg
gaggacatatttccagatgccgtctcaaagagtttggagtttgatttggactcttacttg
agagccaaggccaaggctgtaaatgtagcccttgataaggcagtgccaatgcaatacccg
gagaagattcgagaggctatgcgttattccttgttagctgggggcaagagagtgcggccc
gctctgtgtattgcggcgtgtgaacttgtgggaggtaatgaggatctggcaatgccatcg
gcttgtgctatggaaatggtccacaccatgtctcttattcacgatgaccttccttgtatg
gacgacgacgatttaaggagaggaaaacctacaaatcacaaggccttcggagaggatact
gctgtgctggctggagacgcactgttggcatacgccttcgagcacatagcccgcgcaacg
acaggagtgccagcggatagggttttgagagtcatcgctcatttgggaaaagctgtaggt
tctgagggcttggtggctgggcaaattgtggacattgcgtctgagggagatcgtactgtg
ggcctagaaatccttgagtatgttcacacgcacaagactgccgttcttctggagtctgcc
gttgtcagcggtgccatccttggaggagcttctgaggacgaaatcagcagactgagcaat
tatgcacgcaatgtgggactcttattccaagtcgtagacgatatcttagatgtgaccaag
tcgtctgccgagttgggcaagaccgcaggcaaagatcttgtggccgacaaggctacctac
ccaaagttactggggctggagaaatcgagggcttttgcggaggaactgatacgaaaagcc
aaggaccaactttcggtattcgaccagcagaaggtagcacccttacttgggcttgctgac
tacatcgcttacaggcagaattag
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