Physcomitrium patens (spreading earthmoss): 112274644
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Entry
112274644 CDS
T01041
Name
(RefSeq) 2-dehydro-3-deoxyphosphooctonate aldolase 1
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00541
Biosynthesis of various nucleotide sugars
ppp01100
Metabolic pathways
ppp01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
112274644
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ppp01005
]
112274644
Enzymes [BR:
ppp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
112274644
Lipopolysaccharide biosynthesis proteins [BR:
ppp01005
]
Lipid A
112274644
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-GeneID:
112274644
NCBI-ProteinID:
XP_024360065
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Position
22:4605792..4608133
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AA seq
294 aa
AA seq
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MAASTYSAFFMELQSSEPFFVMAGPNVIESAEHCLKMARQIKTVTDELGLKLIFKSSFDK
ANRTSAKSFRGPGMEEGLKVLQLVKETCGVPVLTDVHDPSQCETVAKVADIIQIPAFLCR
QTDLLVAAAKTGKVINIKKGQFCASSVMRNSADKVRLAGNPNVMVCERGTMFGYNDLIVD
PRNLEWMREAGAPVVADITHSLQQPAGQQLEGGGVASGGLRELIPCIARACVAVGVDGIF
MEVHDNPRQAPCDGPTQWPLRNLKNLLEELIAIAKVTKGKERMAIDLTPVDEDF
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcaacttattctgccttcttcatggagctgcagtcgtccgagccgttcttc
gtgatggcagggccgaatgtgatagagtcagcggagcactgtttgaagatggcgcgccag
atcaaaactgtgacagacgagctgggattgaagctgattttcaagtctagcttcgacaag
gctaatcggacctcggcgaagtcgtttcgagggccggggatggaggaagggctgaaggtt
ttgcagctggtgaaggagacctgtggcgttcctgttttgacggacgtgcacgatccgagt
cagtgcgagacggtggctaaagtggcggacatcatccagattcctgcatttctgtgccgg
cagacggacctcttggtagcagctgccaagaccgggaaagtcatcaacataaagaagggc
cagttttgtgcttcctctgtgatgcgaaactctgccgacaaggttcggctcgcaggaaac
cccaatgtaatggtgtgcgagagaggcaccatgttcggctacaatgacctaattgtggat
ccccggaacttggagtggatgcgagaagcgggtgctcccgttgttgcagatatcactcat
tctctacaacagccggctgggcaacagctggagggaggaggcgttgcgagcggtggcctg
cgcgagctcatcccctgcattgcccgggcttgtgtggccgtaggagtagacggcatcttc
atggaggtgcacgacaaccccaggcaggcgccctgcgatggccctacgcaatggcccttg
cgtaaccttaagaacctgctggaggagctcatcgctatcgccaaggttaccaaggggaag
gagaggatggcgattgacctcactcctgtcgacgaagacttctag
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