Physcomitrium patens (spreading earthmoss): 112274647
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Entry
112274647 CDS
T01041
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112274647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112274647
03016 Transfer RNA biogenesis [BR:
ppp03016
]
112274647
Enzymes [BR:
ppp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
112274647
Messenger RNA biogenesis [BR:
ppp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
112274647
Transfer RNA biogenesis [BR:
ppp03016
]
Prokaryotic type
tRNA degradation factors
112274647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
KH_PNO1_2nd
KH_NusA_2nd
Motif
Other DBs
NCBI-GeneID:
112274647
NCBI-ProteinID:
XP_024360072
LinkDB
All DBs
Position
2:12763531..12766494
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AA seq
817 aa
AA seq
DB search
MVLRSRGVSSLLRAVDAAARRRRYVPSPALRSVYSSSKILDEGTLKPRGFGRNVSNFSTI
SEPVLVTVPEVPAAWRTFPASGHVFQEEAEVGNMKMSFETGKLARFASGAVVVGVGETKV
LVTVVADYKFDGGKDFLPLQVEYREKQYAQGKIPATFMRREGAPKERELLCGRLIDRSVR
PLFPKGFFYDSQIIANVLCSDGDQDPDVLAVNAASAALVISDIPWKGPIGCVRIGRVKGK
FIVNPNMDEFSLSDLNLVYACTAEKTVMIETQAREITNQDYVAALHLAHAEATKLIPPQL
ELAAKVAVLKRPLPVLTVPPEVLEKVRSLAKIAIEAVMGNPQFGKFERGQTLGAIEEEVK
NRLISEGDEVSVKLLPYAFDAVKKEVLRRNIFEKGMRVDGRGLNQVRELQCEAGTYPALH
GSSVFSRGNTQVLCTVTIGAPDDAQRLDSLVGIDRKRFMVHYSFPPFSINEVGRTGGLNR
REVGHGTLAEKALVALLPPEEDFPYSVRVTSECLASDGSSSMATVCGGSLALMDAGIPLR
SHVGAVSVGLVSVSDPETGRVTEYRILTDILGLEDHLGDMDFKIAGTKKGITAIQLDIKP
AGIPLHILCEALEPALVGRTQILDFMEQVISSPRDSTARENLPRSGTMNIQQDSIGRLIG
PQGSNIKNIQKVSDARINISGDGVVTIFARDQASFDLAKQMVEASVGKEVEVGGTYSARV
VAIKDFGAFMELNGGYQGLLHISEIAHERIERVSDYLSIGQELSVVCIGRDLRGNLKLSR
KMTLPLVVPENATQPPIPESTVPRAQASKIKQNVTGS
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggtgcttcggagtcgtggggttagttcactattaagggccgtggatgctgccgctagg
cgtcggaggtatgtgccatcgccggcgttgcgaagtgtttattcctctagcaaaatcctg
gatgaaggtacactaaaaccccggggttttggaaggaatgtctcgaacttttccacgatt
agcgaacctgtcctagtaactgttccggaggtacctgcagcgtggcgaacgttccctgcc
agtggccatgtttttcaagaagaggcggaagtgggaaatatgaagatgagctttgagaca
gggaagctggcccgatttgcgtcaggggctgttgtggttggagttggtgagacgaaagtt
ttggttacagtggtggccgattacaagtttgatggaggcaaggactttctgcccttgcaa
gtagaataccgtgagaagcaatatgctcagggaaaaattccggccacctttatgaggcgt
gaaggtgcgcccaaagaaagagagcttctgtgtggtcgtctcatagacaggtcggttcgt
ccacttttccctaagggttttttctatgattctcagatcatagcaaatgtgctatgttcg
gatggtgaccaggaccctgatgtccttgctgtcaatgcagcctcagcagctctagtgatc
tcagacattccttggaaaggtccaatcggttgtgtgcgaattggtagagtgaagggaaaa
ttcatcgtcaatccgaacatggatgaatttagtttgagtgacttgaatctggtatatgca
tgcacagcagagaaaactgtgatgattgagacgcaggctcgtgagattacaaaccaggat
tatgtagccgctctgcatttggctcatgccgaggctactaagttgatcccaccgcaatta
gagttggctgctaaagtagctgtgctgaagcggcctctgccagtactcactgttccacct
gaagtattagaaaaggtcagatctcttgcaaagattgctattgaggctgtgatgggcaat
cctcaatttggcaaatttgagcgcggacaaactttgggagcgatagaagaggaggtgaag
aacagattgatctccgaaggtgacgaggtatctgtaaagcttttgccgtatgcatttgat
gcagtgaagaaagaggtgctgcggcggaacatctttgagaaaggtatgagagtggatggg
cggggtcttaaccaagtgcgcgaattgcagtgcgaggctggaacgtatccggcccttcat
ggatcctccgtattctctagaggcaacacacaggttctgtgcacagtcaccataggtgct
cctgacgatgcccaacgtttagattctcttgtcggaattgatcgaaaacgattcatggtc
cattatagttttcctcccttttctattaacgaggtcgggcgtacaggaggcctaaaccga
cgagaagttggccatggtacactagcagagaaagcattggttgcgttgctgccaccagag
gaagacttcccatacagtgttcgtgtcacttctgagtgtctggcatcggatgggtcatct
tccatggccacggtctgtggtggaagtctggcattgatggatgcaggtattccattgcgc
tcacatgtgggtgctgtctcagttggcctggtgagcgtcagtgatcctgaaactgggcgc
gtaacggagtatcgaattctcaccgatattttagggttagaagatcaccttggtgatatg
gatttcaaaattgctggtactaagaaaggtatcacagccattcagcttgatatcaaacct
gcgggcattccactgcacatcctatgtgaggcgctggagcctgcattagtcggtcgaaca
cagatcttggatttcatggaacaggtcattagtagccctcgggattctactgcccgagag
aatttgccgcgcagtggaacaatgaacatacaacaggacagtatcgggcgcttgatagga
cctcagggttcaaacatcaagaatattcagaaagtttctgacgcacgtataaacatatcg
ggagatggagttgtgacgatttttgcaagagatcaggcctcgtttgatctggcaaagcag
atggttgaagcatcagtagggaaggaagtggaggtggggggcacctattcagctagagtg
gtggcaatcaaggactttggggctttcatggaacttaatggaggttatcagggtttgctt
catatctcagaaatcgcacatgagcgcattgaacgcgtatcagactatctttccattgga
caagagttgtccgttgtctgtattggtcgtgacctgcgtggcaatctaaagctgtctcgg
aaaatgactttacccttagttgtgccagaaaatgccactcagccaccgattcctgaatct
acagtcccgagggcacaagcttctaaaatcaagcagaatgtgaccgggtcataa
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