Physcomitrium patens (spreading earthmoss): 112274864
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Entry
112274864 CDS
T01041
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A-like
KO
K14026
SEL1 protein
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112274864
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Gene cluster
GFIT
Motif
Pfam:
Sel1
TPR_27
ANAPC3
TPR_2
Motif
Other DBs
NCBI-GeneID:
112274864
NCBI-ProteinID:
XP_024360456
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Position
22:complement(6720421..6724711)
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AA seq
709 aa
AA seq
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MVSSETKISGFRMGLSRWRGGGIILLAVALIVVLSLPALCTAAANSPKKDGSTILLFLGS
DSDDNRDDGSLPDGEDGPSDSLQGKAEDAPPEWDEFSDSQDSPRTDEDLDSGSWSQVLEE
PSIWDSRNTKFALGIRKMVEAVDEEDPRMLNNAIEILRSEAVDGNAHAQSTLGFLHWMAI
GVPYSDAKAYLYHEFAKEGGNPQSKMALAYRHYRNQEYEKAVKLYSELAVITMTSFVSSR
EGPLLEYVRLNYGLEESKDVRKRFRGEDDDDFQFLEYQARKGHPDFMFQLGVFYYYGLRG
VRRDHSKALFWLLKAVEKGESRAFELIGEIYARGYGVERNYTKALECFKAAADRKQHSAL
NGIGFLYIKGQGVEGKNYTKAREYFQRAAESSNVDGFYNLGILYLKGLGVEKDYARARDL
LVDAANKGHSKARYYLAIMLHKGSAGMKKDLTHAAALYKLVAERGPWGRLMRQALEFYIK
GNVGKALLLYSRTAELGYEVGQSNAAWLLEKYRGRICIGSSGICTTEERHERAHNLWRHS
SEQGNEHASLLLGDAYYYGRGAAKDLERAGEAYIRAKEKHSSQAMFNLGYMHERGLGLPL
DLHLAKRYYDEALEEEPAAFVPVTLALTSLWLRQHYSGSFLVKVIDSLPDLQTNLEEWWN
KMTVDELDALLVTLLMSLLFVVYVRQRHRQEYAAAAAAAAAPIPMVPPQ
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggtgagtagtgaaacgaagatcagtgggtttaggatggggctatcacggtggcgtggg
ggtggcattattctgctcgcagtggcgttgattgttgtgttgtcgctccctgctctttgc
accgcagcagctaattctcctaagaaagatggctcaaccatcttgttgtttttgggttca
gactcggatgataatagagacgatggtagtcttccagatggcgaggatgggccatctgat
agcttgcaggggaaggctgaggatgcccctcccgaatgggatgagtttagtgactctcaa
gattcgccacggactgacgaggacttggattcgggatcgtggagccaggtccttgaggag
ccatctatttgggattcacgtaatacaaagtttgctttggggattcggaagatggttgag
gcggtggatgaggaagacccccgcatgctgaacaatgcaattgaaattttgcggtcagag
gcagttgatggaaatgctcatgctcagtcaactcttggttttttgcactggatggcaatc
ggtgtaccttatagtgacgcgaaggcttatctctaccatgagttcgctaaagaaggcgga
aatcctcagtctaaaatggcactggcgtatcgccactatcgcaaccaggaatatgaaaaa
gctgtgaagctttattctgagctcgctgtcattaccatgacaagttttgtaagttcccga
gagggtcctcttttagagtacgtgcggttgaattatggattagaggagagcaaggatgtg
cggaaaaggttcagaggggaagacgacgatgacttccagtttttggagtatcaggctcgc
aagggacatccagattttatgtttcagcttggggtattttactactatggcttgcgaggg
gttcgacgtgatcacagtaaagcactcttctggttgctgaaggcagtggagaagggcgag
tctcgcgctttcgaattgattggggagatttatgctcggggatatggtgtagagaggaat
tatacgaaagccctggagtgctttaaggctgctgctgaccggaagcaacactctgccctc
aatggaataggttttctttatattaaagggcaaggtgtggaaggcaagaactatacgaag
gcaagggagtatttccaacgcgctgcagaatctagcaatgtggatggattctacaatctt
ggcatcctctacttgaagggtctgggagttgagaaggattatgcacgtgctagggatctc
ttggtggacgctgccaataaagggcattctaaagctcggtactatcttgcaattatgttg
cacaagggctcggcgggcatgaagaaagatcttacgcacgctgctgcattatataagctc
gtagcagagagggggccttggggaagattgatgcgtcaagccttggagttttacattaaa
ggcaatgttggcaaagcactgttactttactctcgtactgcagagcttggctatgaagtg
ggtcaaagcaatgcagcttggctgcttgagaagtaccggggtaggatctgtattggaagt
tctggcatttgcacaacagaagaacgtcacgagcgagctcacaatctgtggcgacattct
tccgagcagggcaacgagcatgcgtcgttgctattaggagacgcttactattatggccga
ggagcagcgaaagatctggagagagcaggagaggcttacattagagcaaaggagaagcat
agttcacaagcaatgttcaatctgggctacatgcacgaacgaggcttgggtttaccattg
gatctccatcttgcgaagcggtactatgatgaagcacttgaggaggagccagcagcattt
gtgcctgtcactcttgctctcaccagcctctggttacgccagcattacagcgggagcttt
ctggtgaaagtcatcgattccttgccagacttgcaaacgaaccttgaggagtggtggaac
aaaatgaccgtggatgaacttgatgcactgttagtcactttactcatgagcttactattt
gttgtgtacgtcagacaaagacatcggcaggagtatgcagcagcagctgctgctgctgct
gccccaattcccatggtgcccccgcagtga
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