Physcomitrium patens (spreading earthmoss): 112275087
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Entry
112275087 CDS
T01041
Name
(RefSeq) coronatine-insensitive protein 1
KO
K14485
transport inhibitor response 1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112275087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112275087
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112275087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
LRR_At5g56370
F-box_5
LRR_6
F-box
Motif
Other DBs
NCBI-GeneID:
112275087
NCBI-ProteinID:
XP_073386384
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All DBs
Position
22:3498536..3502142
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AA seq
693 aa
AA seq
DB search
MWCNCLVSVKIKFSGTMGWLQLRDGVQRGNSGWSSGLEIGYSGVGNSVCDENVEFLHPGV
MLEASFPFADGSVAAWGRRICKMGSWRGAKATRVDEDHFPLLQFPDEIIEKVIGFLTNPV
DRNSTSLVCTRLKAIEGESRETVLISNCYAIQPGTLKSRFPNAKSITIKGKPRIVDFSLI
PHAEVWGAYATPWVDLLKEHYRPIRHLKMKRMTISDSDIKRFVSACGYSLERLEFEKCSG
FSTTGLQYIAGACRNLVVLNLSEADILQGDAPYWMTSLVNTASSLRVLDLYLTEVEDVEQ
SVLERLAKQCHTLRLCDALKINHVLPVVTAACETVRHLGIGLSFQNGDSPNQIAEALGRC
KELEGISAVWDPDEVSAMMLMPVAARLKTLDLTYALLEQPELTDLLGACVNLEDLQCTDV
IRDRGLLEVGTCCKKLRSLVVQQDAAGFVTQNGLTAVAKGCFLLEKIIIYAADMTNEALE
TLATNCPNLSDIRICLVQKYDGSHPVVELEGNSTLNLGVKALLMKCPKARRLALCFSRFG
LTNVVITDEGMKHIGEYGGNLHIITLTNCGGSNAGLEYIAKGCNELRKLELRHCPFGDAS
MEALARGCKSLKQLWVQACQVELRGVRLLAQRPGLTVEIVEESNNDGDITPWQLIAYASV
APPRKDLPDNIDYVHEGYCKPLYCKNYLCPSTV
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtggtgcaactgtctggtgtctgtgaagatcaaattctctggcacaatgggttggctg
caactgcgtgacggcgttcagcgaggaaacagcggttggtcttcgggcttagaaatcggc
tacagtggtgtgggaaatagtgtctgcgatgagaacgtggagtttttacatccgggtgtg
atgcttgaggcctcattcccattcgcggatggtagtgtcgcggcttgggggcgtagaatt
tgcaagatgggtagttggaggggagcgaaagcgacgagggtcgacgaggatcacttccca
ttgcttcaatttccggatgaaattattgagaaggtgattggcttcctcacaaatccggta
gataggaactccacatccttggtgtgtacgcgcttgaaggctattgagggcgagtcgcgg
gagaccgtgctaatctccaactgttacgcaatccagccgggtactctaaagtcgcggttc
ccgaatgcgaaatccatcactatcaaaggcaagcctcgcatcgtggatttctcgctgatt
cctcacgccgaggtatggggtgcatacgccaccccctgggtcgacttgctgaaggaacac
taccggcctatcaggcacctgaagatgaagcgcatgacgatttcagattccgacatcaaa
cgctttgtgagtgcttgcgggtatagtctggagaggctggagttcgagaaatgttctggg
tttagtaccacggggttgcagtacatagctggggcatgtcgcaacctggttgtcctgaac
ctctctgaagccgacattcttcagggtgatgcaccctactggatgacaagcctcgtcaac
acagctagttcgctccgagtccttgatctctaccttacggaagtggaggatgtcgaacag
agtgtgcttgagaggctagctaagcagtgtcacactttaaggttatgcgatgctctgaag
ataaatcatgtgttaccggttgtgacggccgcttgcgaaacagtccgccacttaggcata
gggctgagttttcagaacggtgacagccccaatcagatagcagaggcgcttgggagatgc
aaggagctggaaggaatctcagcggtgtgggatcctgacgaggtatcggcgatgatgttg
atgcccgttgctgctcggcttaagactttggacctcacctacgccctactcgaacagcct
gagctcacggacctgcttggcgcttgtgtgaatttggaggatcttcagtgcactgatgtc
atacgagataggggactgctggaagtcggcacctgctgcaaaaagctgagaagtctagtc
gttcaacaagacgcagcgggttttgtaacacagaacggtttgactgccgtggcgaaaggg
tgcttcttgctggagaagatcatcatatacgccgctgatatgaccaatgaagctttggag
actcttgcaaccaattgccctaatttatctgatatccgcatatgccttgtccagaagtac
gatggttcccatccagtcgtggagttggaaggaaactccacattgaatttgggagtcaag
gcacttctgatgaaatgtccaaaagctcggcggctggcgctctgtttcagcagatttggc
ttgacaaatgtagtgatcaccgacgagggcatgaagcacattggcgaatatggaggcaac
cttcacatcatcacgcttacaaattgtggcggcagcaatgcaggccttgaatacattgcc
aagggttgtaacgagcttcggaaactcgagcttcgtcattgtccatttggagatgcaagt
atggaggcccttgctcgtgggtgcaaaagcttgaagcaactgtgggttcaggcctgccaa
gttgagctcaggggtgtgaggttgttggctcaacgaccaggcttgactgtggagattgtc
gaggagagcaacaatgacggcgatatcactccatggcagctcattgcctacgcttccgtt
gcacccccgcggaaagaccttccggacaacatcgactatgtccacgaaggatactgcaag
cctctctactgcaagaattatctgtgccccagcaccgtttag
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