KEGG   Physcomitrium patens (spreading earthmoss): 112275105
Entry
112275105         CDS       T01041                                 
Name
(RefSeq) uncharacterized protein
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp03018  RNA degradation
ppp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112275105
  09123 Folding, sorting and degradation
   03018 RNA degradation
    112275105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppp03019]
    112275105
   03041 Spliceosome [BR:ppp03041]
    112275105
Messenger RNA biogenesis [BR:ppp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112275105
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     112275105
Spliceosome [BR:ppp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    112275105
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 112275105
NCBI-ProteinID: XP_024360900
UniProt: A9T4B1
LinkDB
Position
22:797665..799294
AA seq 91 aa
MSGDAASAQPTGSAKTPNDFLKSIKGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEY
VNGQLKNKYGDAFIRGNNVLYISTTKMTLGD
NT seq 276 nt   +upstreamnt  +downstreamnt
atgagtggcgatgctgcgtcagcgcagcccacggggtctgcgaaaacgcccaacgatttt
ctcaagtccatcaagggccgccccgtagttgtcaagctcaattctggcgtggattatcga
ggtattctggcttgtttggatggctatatgaacattgccatggagcagacagaggagtat
gtaaatggtcagttgaagaacaagtatggtgatgctttcattcggggcaataatgttttg
tacattagcacaacaaagatgactttgggagactag

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