Physcomitrium patens (spreading earthmoss): 112275171
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Entry
112275171 CDS
T01041
Name
(RefSeq) DNA repair protein RAD4
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
112275171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112275171
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
112275171
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
BHD_1
BHD_2
Rad4
Transglut_core
Motif
Other DBs
NCBI-GeneID:
112275171
NCBI-ProteinID:
XP_024361054
UniProt:
A0A2K1IMK6
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Position
22:complement(4586833..4594204)
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AA seq
1034 aa
AA seq
DB search
MRTRRSKKSQEGDSGLDSLLRSLHEDDASARGGDGTAAPDTLADASRHTVDQLLDRVGSK
RKKRVGVSSRAIIDLPDGRGSQRNTPKVVCGMRARTTQELESSQRNSEPSTSEPASASLS
QPVERQEDNDSHVPCDEDFDWEDGDDGTRIEGADDTIQKGWSGKITFDVDNSPGEESEKR
SKKFNLRRANANDKEFAAQVHMAHLLCLLARGRIVSQSSDDSLLQAALVSLLPPRLLPSA
DADRVTIGRVEHLVSWFKNQFRLLTPDEGPSRLHKEDAEALESRLQEVLQKQCGSAEELA
ALSVAMFRGLGYICRYVTILDVASIKPDAESLEASVDWDPSAPFCHSRIGPQFQFELRQQ
VAELSKVLARPGPQVSTNTSSPMGEILAMPSGDTGRRNSGGSTASTPPGERGLDGSGRGG
GRGRGRGRGRGKGKNIDDESPLGAGAISKTTPAKKGRRRTKADNNVKQEESPQTVRRNSK
RKGDEEFEAQLAMALAATAAAAKAEATQTSPASNGKEESSVKELCWSQRRDSTESNGGKS
KLFEFGAKGVSSGSVWSWKMGPVLHWAEIYCGGEGSTGRWVHVDATRGIVDGAAQVEGQT
AACRSPLRYVVAFAGAGAKDVTRRYVSLWSSVEPLRVDSEWWESTMLPLKQLEAAATSGP
SVILPSSMSSQSTLGKKSEISDKSAGNLPQWTPRADREDMELDTKLFTEPLPTNQQAYKT
HHIYVLERWLKKYEIIYPKGPVLGYCAGQPVFRRSCVQTLHTSDRWLREGRKVKPGELPA
KIVKSRATPKQSTGDAEDSTQEEGKKEPIMAELFGEWQTEEFQLPQAVGGIVPRNERGQV
DVWSEKCLPPGTVHLRFPRLVPVCQRLGVDFAPAMVGFEIRRGHSVPVFEGLVVCEEFKD
AIMAAYAEYEDQRAIQLLKKREERATIRWRQLLLSIATRKRLRETYQGDPSEEAAAVTTK
QKISPEPASNTVQGESVTNLSTSPSKEDTSSQAAEAANSAHKHHYLEDNESHNAETGITT
KRCRCGSMIQVEQM
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgcggactcgacggagcaaaaaatctcaggaaggagattctggcttagatagcctcctc
aggagcttgcatgaagatgacgcttcagctcgcggtggagatggcaccgctgccccagat
actttggcggatgcgtcgcgtcatactgtggatcaactgctggatcgggttggatctaaa
cggaaaaagcgggttggagtttcatccagggccatcattgatttacctgatggacggggt
tctcagaggaatactcccaaagtagtttgtggaatgcgtgcacggacaactcaagagctt
gaatcaagccagcgaaattctgaaccgagcacgtctgagccggcaagcgccagtctttct
caaccagttgaaagacaggaggataacgacagccatgttccatgtgatgaggacttcgat
tgggaagacggtgatgatgggacccgaattgaaggagctgatgatactattcagaaagga
tggtctggaaaaattaccttcgacgttgataacagtcctggagaggaatcggaaaagaga
tcgaagaagttcaatcttcgaagggctaatgccaatgacaaggaatttgctgcccaagta
catatggcacatttgctgtgtttgttagctcgaggaaggatagtatctcaatcaagtgat
gattcgctactccaggctgctcttgtttctttattgcccccccgtcttcttccatctgct
gatgcggacagagtaacaattggacgcgtagagcatctagttagctggtttaaaaaccaa
ttccgattgctgacgcctgatgaaggtccatcaagactccacaaagaggatgctgaagca
ttggaatcacgtttgcaagaagttcttcagaagcagtgtggctcagcagaagagcttgca
gcactttcggttgcaatgttccgagggctgggttacatttgtaggtacgtgacgatactg
gatgttgcctccattaaacctgatgccgaaagtcttgaagcgtctgttgattgggatccc
agtgctccgttctgccattcacgaatcgggcctcagtttcagtttgagttgaggcagcag
gttgcagagcttagcaaggttttagctcgtcctggacctcaagtatcaacaaacacttct
agtccaatgggtgagattctggcgatgccatctggagatactggtagaagaaacagtgga
ggctccacagctagtactccacctggagagaggggccttgatggttctggtcgcggcggt
ggtcgaggtcgaggtcgaggccgaggtcgtggcaaagggaaaaatattgatgacgagtct
ccactaggggcaggtgcaattagtaagaccacaccagctaaaaagggacgacgacgcaca
aaagcagataataatgttaaacaggaagaaagtcctcagactgtaaggcgaaattcgaaa
aggaaaggggatgaagagttcgaagcacagctagccatggcacttgctgccactgctgca
gctgcaaaggcagaggccacacagaccagtccagccagcaatgggaaagaggagagcagc
gtcaaggagctttgttggtcacaacgacgggacagtaccgaaagcaatggaggaaagtcc
aaattatttgaatttggggcaaaaggtgttagtagtgggtctgtatggtcctggaagatg
ggtcccgtgttgcactgggcagaaatctactgtggaggcgaaggcagcactggaaggtgg
gtacacgtggacgccactagagggattgtagatggagctgcacaagtggaagggcaaaca
gctgcgtgtcgatcaccattgcgttatgttgttgctttcgctggtgctggagctaaagat
gtgacacgcaggtacgtgagcttgtggtcatctgtagaacctctcagggtggattcagaa
tggtgggagtcgaccatgcttcctcttaaacaactggaagcagctgcaacttctggacct
tcagtgatacttccatcctcaatgtcctcgcaatctaccttgggaaaaaagtcagaaatc
agcgataaatctgctggaaatttgcctcagtggactcctcgcgctgatcgagaggatatg
gaattggacacaaagctttttacggaacctctgccaactaatcagcaggcttacaaaact
catcacatttacgtgctggagaggtggcttaagaagtatgaaatcatatatccaaaaggt
ccagtgctgggatactgtgctgggcaaccagtcttccggcggagttgtgtgcagacgttg
cataccagtgacagatggcttcgagaaggtcgcaaagttaaaccgggggagttgcctgct
aagatagttaaatcgcgagccacaccaaaacagagcactggcgatgctgaggactcaaca
caggaggaaggcaaaaaggaacccatcatggccgagttgttcggggaatggcaaactgaa
gagtttcagcttcctcaagcagttggtgggattgtaccgaggaatgaacgggggcaggtg
gatgtatggtcggaaaagtgcttgccacccggcactgtacacttgcggtttcctcgactg
gttcctgtgtgtcaacgtttaggagttgattttgcacctgctatggtaggctttgaaatt
cgcagagggcattcggtaccagtgtttgaaggactggtggtatgcgaagaattcaaagac
gcaataatggcggcgtatgctgaatacgaggatcaacgagccatacagcttctgaagaaa
agagaggagcgagcaacgatccgatggcgccagcttctgctctcaatcgccactcggaaa
cgtctgcgagaaacgtaccaaggggacccttcagaagaagctgcagctgtcaccacaaag
cagaaaatttctcccgaacctgcatcaaatacagtccaaggtgagagtgttactaacttg
tctacttcgccttccaaggaagacaccagttcccaagcagccgaggctgcaaactctgca
cataagcatcactacctggaggataatgaaagtcacaatgcagagactggcatcacaaca
aagcggtgtcgatgtggatctatgatccaagtagagcagatgtag
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integrated database retrieval system
