Physcomitrium patens (spreading earthmoss): 112275181
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Entry
112275181 CDS
T01041
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03030
DNA replication
ppp03410
Base excision repair
ppp03420
Nucleotide excision repair
ppp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112275181
03410 Base excision repair
112275181
03420 Nucleotide excision repair
112275181
03430 Mismatch repair
112275181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppp03032
]
112275181
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112275181
DNA replication proteins [BR:
ppp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
112275181
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
112275181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_lid_RFC1
AAA_22
AAA_19
RCF1-5-like_lid
AAA_16
AAA_5
AAA_30
PTCB-BRCT
Rad17
nSTAND3
RuvB_N
AAA_33
AAA_assoc_2
BRCT_2
Zeta_toxin
NPHP3_N
TsaE
Gp44_lid
Mg_chelatase
AAA_14
AAA_7
Sigma54_activ_2
DNAX_ATPase_lid
AAA_18
NTPase_1
RNA_helicase
ABC_tran
SurA_N
CDC48_N
AAA_11
Motif
Other DBs
NCBI-GeneID:
112275181
NCBI-ProteinID:
XP_024361066
UniProt:
A0A2K1IP65
LinkDB
All DBs
Position
22:14097212..14106048
Genome browser
AA seq
992 aa
AA seq
DB search
MASGDIRKWFMKQPAKSTPAATPASNDTSKGGEKNGTTGRYNSTSKFFPSSSPASQDKDR
KEESKPLSVKASAGSSKRFKGVDSGSEDDEFDKPPTKKIRNVEVSDEKLSSAGRGRGRGR
GRGRGESNVKVTDDMDIDAPPAKTSTGGRGRGRGRGNSDTPGASTSVDEDLESSPKKPSG
RGGRGGGGPSASQADSKPAPAGRGRGGGGGRGGFNFGAREAPPHKGEKEVPQGADDALAN
LTFVISGTLDSLEREEAEHLIKSHGGRVTGSVSKKTDYLLADEDIGGRKSQKAKELGVKF
ITEDGLFEMIRKTKPKAAATSSQAPRPSEPAQPQKAAEVIKPIIPKTDDVRNVKGKIANG
TSSSVGNEKSIASGTESWPYKHRPQSINDIIGNQSIVKQVQDWLVQWEKHHGNAVKGKKG
SSSTSQKKAVLLSGPPGIGKTTTARLVCDLLGYEALEVNASDTRGKSDSNVKNGIGGKTS
NTIKEMISNRSLGFGSKSERKAVLIMDEVDGMSGGDRGGVADLILSIKSSHIPIICICND
KYSQKLKSLINYCLPLPFRKPTKQQMAKRLQQIAKSEGLEVDDLALEELSERVNGDMRMA
LNQLQYMSLRSRSLKYSDVRTRLMASAKDEDVTPFSAVDKLLGFEGGRLRMDERIDAAMS
DMDLVPLLVQENYLNYCGPGGRDDSGTARMDAIARTALSIAEGDIVNVQIHRFRQWQHAQ
MGAFMSSVIPAAYIHGRREVLVQGERNFNRFGGWLGKNSTFGKKTRLLEDVHVHMLASRI
CEPTREAVRLDYLPLLSMHLTQPLHTLPKDEAVQQVVDLLEEYSLDQEDMDTIVSMSTLK
GGEGLLEGVPGATKTALTKTYKQRLSDRRVRSADLLPVMSLPGTKKAAKKPARMNFMAAE
DEESLEALEDAIDDVNEDNDGEDEDEEGADEKSLALLTQSRPGMTVTLDPKSKPGAGRGR
GRGTTKASQAKTPTSSKKSQEQKATSAAKRKK
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgggtgacatacggaaatggttcatgaagcagcctgccaagtctaccccagct
gcaacgcctgcaagcaatgacactagcaaaggtggggagaagaatgggactacgggtaga
tataactccaccagcaagttctttccaagctcctctccagcaagtcaggataaagaccgt
aaagaagaaagcaagccactgtcggtaaaggccagtgctgggtccagtaaaaggtttaag
ggtgttgattcgggctccgaagatgatgaattcgacaagcctcccaccaaaaagatacga
aatgtggaggtaagcgatgagaaattgtcgtcagcggggaggggaaggggaagaggaaga
gggagggggagaggagaatcaaatgtcaaggtaactgacgacatggatattgatgctcct
cctgctaaaacatccacaggagggcgaggtaggggtagaggaagaggtaatagtgataca
cctggtgctagtacatctgtagatgaggatctcgaatcttctccaaagaagccttccggt
cgaggaggaaggggtggagggggaccttctgcatcacaagctgattccaaaccagcgcct
gctggaagaggtcgtggaggaggaggcggaaggggtggtttcaattttggcgccagagag
gctcctcctcacaaaggggaaaaggaggttccccaaggcgcagacgatgctttggcgaac
ttaacctttgttatcagtgggactctggatagtttagagagagaggaagccgagcacctg
ataaaatctcatggtgggcgcgtcacaggctctgtcagcaagaaaacagactatttgtta
gcggatgaagatatcgggggtcgcaaatcacagaaggcgaaggagctcggggtgaagttt
attactgaagacggcttgttcgagatgattcgcaaaactaagccaaaggctgcagcaacc
tcatctcaggcacctcgtccatcagagccagctcaacctcagaaagctgctgaagtgata
aaaccaataataccaaagacagacgatgttaggaacgtgaagggcaagattgcaaatgga
acttcatcatcagtgggcaatgaaaagtcaatagcatctggcacagagtcatggccttac
aaacatcgaccacaatctatcaatgacatcatcggcaaccagtcaattgtgaaacaagtt
caagactggctcgtacaatgggagaagcatcatggaaatgcagtgaagggaaagaaagga
agcagcagtacttctcaaaagaaggctgtgctacttagtgggccgccggggattgggaag
acaacaaccgcgcgtcttgtttgtgatctactaggttacgaagctctggaggtaaatgct
agtgacactcgtggaaagtccgattccaatgtaaagaacggtatagggggtaaaaccagt
aataccataaaagaaatgataagcaataggtcattgggttttggcagcaaaagcgagaga
aaggctgtgttgattatggatgaagtggatggtatgtcgggtggtgatcgcggtggagta
gcagatcttattttaagcattaaatccagccacattcctattatctgcatttgcaatgac
aagtacagtcaaaagttaaagagccttataaactattgcctgcctttaccgttcagaaag
ccaacgaaacaacagatggccaagaggttgcaacaaattgccaaatctgaaggacttgaa
gttgacgatttagctttggaggagctttcagagagggtgaatggagacatgagaatggct
ctgaatcagttacagtatatgagcctaaggtcaaggagtctcaagtattcagatgtgcgg
acaaggctcatggctagtgcaaaagatgaggatgttactcctttctcagctgttgacaag
ttattaggatttgagggaggacgtttacgaatggatgagcgtatcgatgcagcaatgtca
gatatggaccttgtgcctctcctcgtgcaggagaattacttgaattattgtgggcccggt
ggccgggatgatagcgggactgctcgtatggatgccatagcgcggactgccttgagcata
gcagaaggtgacatagtaaatgttcaaattcatagatttcgacagtggcagcatgctcag
atgggtgcatttatgtcttccgttatcccggctgcatatatacatggccggcgagaggtg
ctggtgcagggtgaacgtaacttcaatagatttggaggatggcttggaaagaactcaacg
tttggcaaaaaaactcgtctccttgaggatgttcatgtccatatgctggcttctcgaata
tgcgaacccaccagagaggctgttcgattagactacttgcctctcctctcgatgcatctg
actcagcctctgcacaccttgccgaaggatgaggcagtgcagcaagtggtagatctgttg
gaagagtattcactggaccaagaagatatggatactattgttagtatgtctacattgaag
ggtggagagggactacttgaaggtgtgccaggtgccaccaaaactgctctcacgaaaacc
tacaaacagcgattgagtgatcgtcgcgtacgatctgcagacttgctaccagttatgtct
ttacctggtaccaaaaaggctgccaaaaagcctgcacgcatgaactttatggcagctgag
gatgaagaaagcttggaagctcttgaagatgccattgacgatgtaaatgaagacaatgat
ggtgaggacgaggatgaggagggagcggacgaaaagtcattagccttgctgactcaatca
agaccaggaatgactgtgacactagatccaaaatcaaaaccaggagcaggaagaggtcgt
gggaggggtacaacaaaagctagccaagctaagacacctacatcatccaagaaatcacaa
gagcaaaaagcaacatcggcagcaaagcgcaagaaatag
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