Physcomitrium patens (spreading earthmoss): 112275272
Help
Entry
112275272 CDS
T01041
Name
(RefSeq) DNA mismatch repair protein MSH2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
112275272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112275272
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
112275272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
Motif
Other DBs
NCBI-GeneID:
112275272
NCBI-ProteinID:
XP_024361270
UniProt:
A0A2K1ILS8
LinkDB
All DBs
Position
22:complement(591911..598678)
Genome browser
AA seq
951 aa
AA seq
DB search
MDPDSMEKGDEPKLPELKLDVKQAQGFISFFRRLPENEQAVRFFDRKDYFTAHGDNATFI
ASTYYRTLTVLRQLGSGADSLPGVTINKSMFETIVRDLLLERTDCTVELYEGTGSKWQLV
RSGSPGKLGSFEEVLFASNEMQETPVVMAVNITTRQSERCVGIAFVDMTKRQLGMTEFLD
DDLYTSLESAMVALSCRECIIPMPTAAKSPDDRKLRDVMARCNVLVTEKKKSDFRSRDVE
QDLGRLVKGPAEQHKELVAASDLAAAALAALLTYTELLSDDTNYGKYVIQPYSLDLYMRL
DAAALRALNVTESKTDSNKHFSLFGLMNRTCTQGMGKRLLNRWLKQPLVDVVEITKRLDT
VQAFVEDLELRQDLRSHLRRMPDIERLVSKLEKRKAGLQDVVRLYQASLRLPLIRTCLEK
YDGEFSKDLQEKYGTHLDVWTQPNHLGKFDGLVEAAVDLEQLQNGEYIISADYDNSLQEL
KTGRDDVERQILKVHQQSADDLGLPAEKSLKLDKSTQYGHVFRITKKEEPKVRKKLNSQY
ITLETRKDGIKFTNAKLRRLSEQYTKLTEEYSSAQRELVAKVVDVAATFVEIFSGVAVLL
ADMDVLLSFADLASCSPVPYVRPSITSADEGDIILEGSRHPCVEAQDDVNFISNDCRLVR
GKSWFQIITGPNMGGKSTFIRQVGVNVLMAQVGCFVPCDRAEISVRDCIFARVGAGDCQL
RGVSTFMAEMLETASIIKSATERSLIIIDELGRGTSTYDGFGLAWAICEYLVEVTRAPTL
FATHFHELTALEHSNSPPVHGPPRGPLVGIANYHVSAHIDTKSQKLAMLYKVEEGPCDQS
FGIHVAEFAHFPESVVELAKQKAAELEDFSDTGKDVSGGLSKDEVGTKRKRVSGPDDKVL
GAGRVRRFLQEMAALPVDKMSREETYAKLKALKSEFDRDAATNSWLQQIVH
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggacccagatagtatggagaagggggatgagccgaagctgcccgaattgaagctagat
gttaagcaagcacaggggttcatttctttcttccgcaggcttcccgagaacgagcaagct
gtgcgcttctttgaccgcaaggattatttcactgctcatggtgataatgcaaccttcatt
gccagtacgtactataggacgctcacagttctcaggcagctggggagcggggctgattct
ctccctggtgtgaccatcaacaaaagcatgtttgagactattgtgagggatctcttgcta
gaaagaactgattgcactgttgaactctatgagggcaccggatctaagtggcaacttgtt
aggagcgggtctcctggcaagcttggcagctttgaagaggtcctgttcgcaagcaatgag
atgcaggaaactcctgtagtcatggctgtaaatattactacacgtcaaagcgagcggtgt
gttgggatagcattcgtggatatgacgaagaggcagcttggaatgacagagttcttagac
gatgacctatacaccagtttggagtccgccatggtagctttaagctgtcgtgaatgtatc
atacccatgccaaccgctgccaagtcccctgatgatcgtaaacttcgtgatgtaatggca
cgctgcaatgttttggttactgagaagaagaaatctgattttaggtcgcgagatgtagaa
caagatttaggccgattagtcaaaggtcctgctgagcaacataaagaactggtggcagca
tctgatttagcggctgctgctcttgccgcgcttctgacatatactgaactcctctctgat
gacacaaattatggaaaatacgtcattcagccctacagtctggacctctacatgcgattg
gatgcagcagctttacgagctctcaatgtcactgagagcaaaacggattctaacaagcat
tttagtctgtttggtttgatgaaccggacttgcacccaaggtatgggaaaaagattgctg
aaccggtggttgaaacaacccctagtggatgttgttgagataaccaaaaggctggataca
gtgcaagcgtttgtggaggatctagaattaaggcaggacttgcggtctcacctacggcga
atgcctgacattgagcgcttggttagcaagcttgagaagcgcaaagcgggattgcaagat
gttgtgagattgtatcaggccagtttgaggctgcctttgattcgaacctgcctggagaag
tatgacggagagttttccaaggatttgcaagagaaatacggcacccatcttgatgtatgg
acacagccaaatcatctaggaaaatttgatggattagtcgaggcagctgtcgatcttgaa
cagctccagaatggagagtatataatttcagcagattatgacaacagtcttcaagagctc
aaaactgggcgcgacgatgtggaaaggcagatacttaaagttcaccagcagtcagcagat
gacctggggcttcctgcggaaaagtcattgaagttggataagagtacacagtatggacat
gtttttaggattactaagaaggaagagccgaaggttaggaaaaaattgaatagtcaatac
ataaccttggaaactaggaaagacggcataaagttcacgaatgccaagctgcgaaggttg
agtgaacagtacacaaagctcacagaggaatactcgagtgcacagcgagagcttgttgca
aaggttgtggatgttgcagcaacatttgttgagattttctcaggagttgcagttcttctg
gctgatatggatgtacttcttagctttgctgacttagcttcctgcagtcccgtaccttac
gtcaggccctcaatcacttctgctgatgaaggtgacataattctggaaggaagtcggcat
ccatgtgtagaagcccaggatgacgtcaatttcatttccaacgattgtcgattggtgcga
ggcaagagctggtttcagattatcacaggacccaatatgggtggaaagtccaccttcatt
agacaggttggtgtgaacgtgttaatggctcaagttggatgctttgtaccatgcgaccga
gcagagatcagtgtgcgtgattgcatctttgcgcgtgttggtgctggagattgccagcta
cgcggagtgtcaacatttatggctgaaatgctggaaacagccagcattattaagtctgct
acagagcgttctttgatcattattgatgaacttggtcggggtacttcaacttacgatgga
tttggtttggcgtgggcaatatgtgagtacttagtggaggtcactcgtgcacccactctc
tttgcaacccactttcacgagctaacagctttagaacattcaaactctccacctgtccat
ggacctcccagaggtccacttgtagggattgccaactatcacgttagtgctcatatcgac
acaaaatcacagaaacttgccatgctctacaaggttgaagaaggaccttgcgaccaaagt
tttggtatccatgtagctgagtttgcgcattttcctgaaagtgttgttgaactcgctaag
cagaaagcggcagaattagaggatttctctgatactgggaaggatgtttcaggggggctt
agtaaggatgaggttggcactaagcgaaagagagtaagtggccctgatgacaaggtatta
ggagctgggcgggtgcgaaggttccttcaagagatggcagcattgcctgtagacaaaatg
agtcgtgaggagacttatgccaaattaaaggccttgaaaagtgagtttgacagagacgcc
gcaacaaactcatggctgcaacagatagttcattga
DBGET
integrated database retrieval system
