Physcomitrium patens (spreading earthmoss): 112275390
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Entry
112275390 CDS
T01041
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00040
Pentose and glucuronate interconversions
ppp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112275390
Enzymes [BR:
ppp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112275390
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112275390
NCBI-ProteinID:
XP_024361520
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Position
22:complement(13109750..13112514)
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AA seq
564 aa
AA seq
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MLVSHSRGIKHRTALHRRASTSLQVPRRVNAGARGGLGRRTRQTRNWYYTVGVMAKLAPL
IVVFLLVCVQWQGAVSGTELKPLNGGKSQPYDVDSITGETIYDDESSFASSDPYNYADNG
GDNYQFSTSESDGYSADPGTDEPVALPNGDGFAVSQDAPLSGVNSTTADGSSSVVSDDGF
DMVENDDDNSSTASSDDQNMGAALASGGCSTGNPVDDCWKCNPNWANERQKLATCAVGFG
RGATGGRNGRIYVVTSASDDNPANPAPGTLRYAVTRLEPLWIIFAYSMTIRLKNELMITS
FKTIDGRGVTIRISGGAGLTLQRVNSVIIHGIAIHDIQATGPGRIMTSTAHTGNRGRCDG
DAISIFSSKNIWIDHVYLARAADGLIDVIRGSTDVTITNCYFTQHDKVMLLGASMNDDMD
RNMRVTVAYNIFGPSLVQRMPRVRYGNVHVVNNDYTSGWGIYAIAGSEAPTILSQGNLFH
AGQGSKQVTKRINDGGPSFGDPRGWNWKSEGDVFYSGAYFSSVQMGWSAQSYSKTASCSP
RPASMVSRMVKTAGPLNCRKGSMC
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtcagtcacagcagaggaattaagcatcgtaccgcattgcatcggcgggcatcg
acatccttgcaggtaccgcggagggtgaatgctggagctcgaggtggcttaggtcgaagg
actcgacaaacccggaactggtactacaccgtcggtgtgatggccaagctagcgccgctc
atcgtggtgttccttctcgtctgcgtccagtggcagggggctgtgtctgggactgagctc
aagccactgaatggggggaagtcccaaccctatgacgtggacagcattacgggtgaaacc
atctatgatgacgaatcatcctttgcaagcagtgatccttacaactacgcggacaatggc
ggggataattatcagtttagtacctctgagtcggatggatattcagcagaccccggaaca
gacgaacccgttgctttgccgaatggagatggctttgccgtgagccaggatgctccactc
tccggagtcaacagtactactgctgacggaagcagctctgttgtcagtgacgatggcttc
gacatggtggagaacgacgatgataattcttcgactgcttcgtccgatgaccagaacatg
ggcgccgctttggcctcgggtggatgctcaacggggaatccggttgacgactgctggaaa
tgtaatcctaactgggccaatgagcgtcagaagttggcaacgtgcgcggttgggttcggg
aggggcgccacgggtggcaggaacggcaggatatacgtcgtcacatctgcgagcgatgat
aaccccgcgaatcctgctcccgggacgttgcggtacgctgtgactcggttggagccgctg
tggatcatattcgcgtacagcatgaccatcaggttgaagaacgagctgatgatcacgagc
ttcaagacgatcgacggtcgtggcgtgactatacgcatctccggaggagccgggttgaca
ttgcagcgcgtcaacagcgtcatcattcacggtattgccatccacgacatccaagctaca
gggcccgggaggatcatgacctcgactgcccacacaggcaaccggggcagatgtgacggc
gacgcaatttcgatcttctcgtcaaagaacatctggattgaccatgtctacctcgccagg
gctgcagatggactgattgatgtgatcaggggctcgacggacgtgaccatcacgaactgc
tacttcacccagcacgacaaggtgatgcttctcggagctagcatgaatgacgacatggac
aggaacatgcgcgtgactgttgcatacaatattttcggtccttcacttgtgcaaagaatg
ccaagggttcggtacggtaacgtgcacgtcgtgaacaatgactacacctcagggtggggg
atttacgccattgccggcagcgaggctcctaccatattgagccaaggtaacctgtttcat
gcaggacagggttcgaagcaggtgacgaagcggattaacgatggagggccaagcttcggg
gatcctaggggctggaattggaagtcggagggtgacgtgttctattccggggcttatttt
tctagcgtccagatggggtggtcagcccagagttattcaaagaccgcaagctgctcacct
cgtccggcgtcaatggtgtcaaggatggtcaagactgctggtccgttgaattgtcgcaaa
gggtctatgtgttag
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