Physcomitrium patens (spreading earthmoss): 112275632
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Entry
112275632 CDS
T01041
Name
(RefSeq) coatomer subunit beta'-1
KO
K17302
coatomer subunit beta'
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112275632
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112275632
Membrane trafficking [BR:
ppp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
112275632
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
112275632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
NBCH_WD40
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR35_TULP_N
TPR_12
WD_LRWD1
Clathrin
HEAT_GCN1
TPR_2
TPR_GEMI5
Oxygenase-NA
Motif
Other DBs
NCBI-GeneID:
112275632
NCBI-ProteinID:
XP_024361941
LinkDB
All DBs
Position
2:complement(1189053..1197468)
Genome browser
AA seq
926 aa
AA seq
DB search
MPLRLAIKRKLAQRSERVKCVDLHPTEPWILSTLYSGSVYIWNYQNQTLVKSFEVTDLPV
RSAKFIPRKQWIVAGSDDMFIRVYNYNTMDKVKQFEAHTDYIRCVVVHPTLSYVLSCSDD
MLIKLWDWEKGWICTQIFEGHSHYVMQVTFNPKDSNTFASASLDRTVKIWNLGSPEPNFT
LEAHQKGVNCVEYFTGGDRPHLITGSDDQTAKVWDYQTKSCVQTLEGHSHNVSAVCFHPE
LPIILTGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKGSKRIAIGYDEGTIMIKIG
KEAPVASMDGSGKIIWAKHNEIQTVNIKAVGADFEVTDGERLPLAVKELGSCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALDFAWSTDGEYAVRESTSKIKTFGKNFQ
EKKSFRPSFSAEGMYGGALLGIRSNDLVCFYDWAECRVVRRIDVVVKNIYWSDSGDLVAI
ASESSFYILKYNRDVVVEHFESGTPTDEQGLEDAFELLHEIPERIRTGLWVGDCFIYNNS
AWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKQLNVMSYTLLLNLIEYKTLVL
RGDLEKAEEILPTIPKEHLNSVARFLESRGMVEEALAIATDLDYKFDLAIQLGRLETAKT
IAEESHSESKWKQLGELAMSAGKFEVAEECFGHAKDLSGLLLLHSALGNAQGLTDLAVAA
KEQGKINVAFLSLFLLGKVEDCVQLLIDSNRIPEAAFMARTYTPSEVSNVVALWRNDLKK
INQRAAESLADPQEYPNLFPDWDLACEAEVQHREQRTKFLLAKEYLNYINGQHDDLVDEM
KGLDVNEGPHLENGGFVHENGELVEDQELESYQDGEYVEADQHDVVDVDDEVGFGKSDQL
VDGEGELSKSHPVISTDDGAEEKGLK
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgcctctccgcttagcaataaagcggaaactcgcccaaaggtctgaacgagtgaagtgt
gtggaccttcatccaacagaaccatggatattgtccactttgtactcaggaagtgtttat
atttggaactatcagaaccagacactggtgaaatccttcgaagttaccgatctgcctgtt
cgatcagcaaaatttattcctcgcaagcagtggatagtagcgggctctgacgacatgttc
attcgagtctacaactataacacgatggataaagtgaaacagttcgaggctcatactgat
tacattcgctgtgttgtagtacatccaacattatcttatgttctatcttgctcagacgat
atgctcatcaagctttgggactgggagaaaggttggatctgcacccagatctttgaagga
cattctcattatgtcatgcaagtgactttcaatcccaaagacagtaacacttttgcaagc
gcttccttggatcgaactgttaagatatggaacttgggttcaccagagcccaactttacc
ctcgaggctcatcagaagggtgtcaactgcgtggaatacttcactggtggtgaccgacca
catttgatcacaggatctgatgatcaaacagctaaggtgtgggattaccaaaccaagagc
tgtgtgcagactttagagggtcattctcataatgtgtctgcagtgtgtttccatcctgag
ctccccatcattttaactggttcagaagatgggactgttcgtatttggcatgcaaccaca
tacaggctagagaacacactgaattatggactggagcgtgtatgggcgattggatacatc
aagggttcgaaaaggattgcaatcgggtatgatgaaggaactatcatgattaaaattgga
aaggaggcaccagttgccagcatggatggcagtgggaaaattatatgggcaaagcacaat
gaaatacagacggtcaacatcaaggcggttggcgctgattttgaggttaccgatggcgag
cgcttgcctttggcagtcaaggaacttggaagctgtgatctttatccacagagcctgaaa
cataatccgaatggcaggtttgtggtagtttgtggtgatggtgagtatattatctacaca
gctcttgcttggaggaatcgatcatttggttccgccctggattttgcctggtcaacagat
ggtgaatatgcagttcgcgagagcacttccaaaatcaaaacattcggcaaaaattttcag
gagaagaaaagctttcggccatcgttttcagctgaggggatgtacggtggtgccttgctt
ggaatccgttctaatgacttggtctgcttttatgactgggctgaatgtcgtgtggttcga
aggattgatgtcgtagtcaagaatatatactggtcagatagcggagatttggttgctatt
gcgagtgaaagctcgttttacatcttgaagtacaaccgggatgtggttgtagagcacttt
gaaagtggcacgccaacggatgagcaaggtttggaagatgcttttgaactcctgcacgaa
attcctgagcgaattagaactggcttgtgggttggtgactgcttcatttacaacaattca
gcatggagactcaactactgtgttggtggagaggtgacgacaatgtttcatcttgatcgt
ccaatgtatctacttggatatctcgcaagtcaaagccgcgtgtatcttatcgataagcag
ttaaatgtcatgagctacacattgctgctgaatctgatagagtacaaaaccctagtattg
cgaggagacttagaaaaagcagaggagattctgccgactatccccaaggagcacttgaac
agtgttgcgaggtttttggagtcacgcggtatggtggaggaagcccttgctatcgcgaca
gatcttgactacaagtttgatttagccattcagctcggcaggctggaaactgccaagact
atagctgaagagtcacacagcgagtccaagtggaagcagctgggtgaactcgcaatgtca
gctggaaagtttgaagttgcggaagaatgcttcgggcatgccaaggatcttagcggatta
ttgttgctgcattcagcccttgggaatgctcaagggctcactgacctggcagttgctgcc
aaggaacagggaaagataaatgtggcttttctcagcctctttctgcttggaaaagtagaa
gactgtgtacaattattgattgacagtaaccgtataccagaagcagctttcatggctcgt
acatacacacccagtgaagtcagtaatgttgttgcgttgtggcgaaatgatctaaagaag
attaatcaaagagcagctgaatcactagcagatccacaagagtaccccaatttatttcca
gattgggatttggcatgcgaggcggaagtccagcacagagaacagaggaccaagtttctt
ctagccaaggagtatctgaattacatcaacggtcaacacgatgacttggtagatgagatg
aagggattggatgtgaatgagggtccccatctggagaacggtggctttgtacatgaaaat
ggagaacttgtggaggatcaagaactggagtcctaccaggacggcgagtacgtggaagcg
gaccaacacgatgttgtagatgtcgacgacgaagttggctttggaaaatccgatcagtta
gttgatggagaaggcgaactttcgaagtcacatcctgttattagcaccgacgatggcgcc
gaagaaaagggtctgaaatga
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