Physcomitrium patens (spreading earthmoss): 112275867
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Entry
112275867 CDS
T01041
Name
(RefSeq) coronatine-insensitive protein homolog 1b
KO
K13463
coronatine-insensitive protein 1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112275867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112275867
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112275867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
F-box
LRR_At1g61320_AtMIF1
LRR_4
DUF6213
Motif
Other DBs
NCBI-GeneID:
112275867
NCBI-ProteinID:
XP_024362335
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All DBs
Position
23:12433696..12438563
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AA seq
660 aa
AA seq
DB search
MAAEVVWREDGNIRSRFFRGNEHGPTKKCIFNQLPESVIELIFDRLGSKGDRRAISQVCK
QWHRVDGLTRKNIYIFNCYSIAPSNLSKRFPNLEKIKIKGKPRAYEFGLLVESWGAHAGP
WIEEIASVYPNLEGLALRRMDITDKDLMLLASRCPNLRKLKLHKCSGFSTRGLEFITRSC
RTLRVLDIDESHDMEDTGGPWLQLLEKGDGKLESLNIASAGLEEESIKEVLLKLAPSLKC
ISSLRVSDMELGSFFKILDNSEVPVVELGLGCYSLSQEDPKELVPSFSSRLSKLKILDLK
FTTLNAEIQIELLRHCCSVEELELRSVVGDWGMQVISENCKQLKKIRVDQDTSPYMTNHV
TQKGMISICEGCRELDFLVMYLTDVNNAALAAVGQYLPKLSDFRIVLLEDQDDVEDLPLD
DGIRLLLQGCPMLSRFSVYLRPGGLSNKGLGYIGEFGSKLKWVLLGSSGESDEGFRLMAE
GCRQLERLELRNCPFSDKQLAISILNNLPHLKYLWVQGFGATSGLGVALVTQMPGFVVEV
MATDQQILGYYTVTHPRTDSPDSVCVINYDPLLDNSAEVCEEGSQGDACSYYAERLYSEH
IYSYLRVDEEAPYPGVNKNSHLPKIDENTLYSGVVGLEMYLAGDDNSASSEFCEDSACIC
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggaggttgtctggagagaagatggaaacataagaagcagattttttcggggg
aatgaacatgggccaactaaaaaatgcattttcaatcagctgccggagtcagttattgaa
ttgatattcgatcggctagggtccaaaggtgaccgcagagcaatctctcaggtgtgcaag
cagtggcatagggtggacggtctgacgaggaagaacatttacattttcaactgttactcc
attgcaccctccaacctttcgaaacggtttccaaacttggaaaagattaaaataaagggt
aaaccacgagcttacgaatttggtctactggtcgagagttggggcgctcatgcaggtccg
tggattgaagagattgcgagcgtataccctaatctagaggggcttgctttgcgtcgcatg
gacatcaccgacaaggatttgatgcttctggcctcccgatgccccaatttgcggaagttg
aagctgcacaagtgctcggggttcagtactagggggcttgagttcatcacacggtcctgc
agaactttgcgggtactggatatagacgaaagtcacgatatggaagacactggtgggcct
tggctgcagttgctggaaaagggtgacggcaaattagaaagcttgaacatagcgtctgca
gggttggaggaggagagcataaaggaggtgctgctgaagctcgcaccgtcccttaagtgc
atctcctccctcagggtcagcgatatggagctgggcagcttttttaagatcctggataac
agcgaggtgccggtggtagagctaggtcttggctgctacagtttaagccaggaggatcca
aaggaattggtaccctcgttctcgtcgcggttatcaaagctcaaaattcttgatctcaag
tttaccactttgaatgctgaaattcagatcgaactcttgaggcattgctgtagtgtcgaa
gagcttgagctgcgaagtgttgtaggggactggggaatgcaggtgattagcgagaattgc
aagcaactgaagaaaattcgagtcgatcaagacacttcaccgtacatgacaaaccatgtg
acacaaaagggaatgattagcatctgcgaagggtgtcgagagctcgacttccttgtcatg
tatcttacggacgtcaacaacgcagcacttgctgctgtcggtcaatacctgccgaaactc
agcgacttccgcattgtgttgcttgaggatcaggatgacgttgaggacttgccactcgat
gacggcatccgcttgctccttcaaggctgcccaatgctgagtcggttctcggtgtactta
cggccaggcggcctgtcgaacaaagggttgggatacatcggagaatttggctcgaagctc
aagtgggttctcttgggctcttcaggtgaatctgacgaagggttccgcctcatggctgaa
ggttgtcggcagctggaaaggttggaacttcgtaattgtccctttagcgacaagcagctt
gcaatctcaatcttaaacaacttgccacatttgaaatacctatgggttcaaggctttgga
gctacgtcgggtcttggtgtagctcttgtgacccagatgcccggttttgtcgttgaggta
atggccacagaccagcagatcttagggtattacacagtaacgcaccctcgcacggatagt
cccgactctgtgtgtgtgattaactatgatcctcttctggacaacagtgctgaagtgtgt
gaagaaggatcccagggagacgcttgcagttattacgcagagagattatattccgagcat
atatatagctatctacgagttgacgaggaggcaccttaccctggagttaacaagaacagc
catctccccaaaattgatgaaaacacattgtacagtggagttgtaggccttgagatgtac
cttgcaggtgatgacaacagcgcctcatctgaattttgtgaagacagcgcttgtatatgt
tag
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