Physcomitrium patens (spreading earthmoss): 112275878
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Entry
112275878 CDS
T01041
Name
(RefSeq) protein AUXIN SIGNALING F-BOX 3
KO
K14485
transport inhibitor response 1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112275878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112275878
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112275878
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_6
LRR_At5g56370
F-box-like
LRR_NXF1-5
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
112275878
NCBI-ProteinID:
XP_024362361
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Position
23:7812526..7817835
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AA seq
570 aa
AA seq
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MPSLFPDEVLEHVLVFLTGHKDRNSVSLVCKAWCRAEGWSRRDVFIGNCYASSPTILLRR
FPKLTSLAMKGRPRFTDFGLVPSSWGAFIQPWIEALADHYNGLECLRLKRMTVSDESLRI
VALAFPNFRSLRLSSCDGFTTDGLEWITRHCRHLTELDLQENEIQVRGVGWLTAFPETQT
SLESLNFANIHTPLDEYDFHSLYALVTRCPKLTKLKLNREITLEQMQRLLLQAPQLEDLG
TGAYNQNLTWGRLHELQSSFRRVRNIRTLSGFWDTVPMCLPTCFPICKELITLDLSTVAL
TPADFTKFITNCVNIQRLLVQDSVGDRGLFYVGRSCRQLRELRVYPFNDQSNVTEKGLVA
ISDGCREMRKILYFCKQMTNAAMIQFARNCSNMTHFRMAMVTVYDPDCDTKQPLDEGFGA
VCKLCKDLRRLSLSGLLTDKTFEYIGTYAKKLETLSVAFAGDTDMGMVHVLDGCPVLRKL
EVRDCPFGDEALLSGIDKYESMRALWMSSCRVTIDGVQFLASKNPNLNVEVIRDIEMLHH
PEYVEKLYVYRSIAEPRQDAPPFVYIYSCT
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgccctccttgtttccagacgaggtgctggagcatgttttagtctttctgactggtcac
aaggacagaaactctgtgtcccttgtgtgcaaagcgtggtgtagggctgaaggatggagt
agacgggatgtttttattgggaactgctatgcatcttcgccgactatcctcctgaggagg
tttcccaagctgacatccctggcgatgaaagggcggccgaggttcaccgactttggtctg
gtgccttcgagttggggggctttcattcagccgtggatcgaggccttggccgatcactac
aatgggttggaatgtcttcgtttgaagcgcatgactgtgtccgacgagagtttacggatt
gtggcccttgctttccccaattttcgttcgctgcgcttgtccagctgtgatgggttcacg
actgacggtctggaatggataacgagacattgcaggcatctcacggagctggatctgcag
gaaaatgaaattcaagtccggggtgtgggttggctgacggcgtttcctgagacacaaaca
tctctggaaagtctcaattttgcgaatatccatacaccgttggatgaatacgattttcac
tcgctgtatgcattggtgactcgttgtccaaagctgacgaagttgaagttgaatagagag
atcactttggaacagatgcagaggcttcttctgcaagctccccagcttgaagatctgggt
acaggggcttataaccagaatctgacgtggggtagactccacgaacttcagtcttcattt
aggagagttagaaatattcgtactctttcagggttttgggacacagttccaatgtgctta
cccacatgtttcccaatctgcaaggagttgatcaccctggacctctcgacagttgcactc
accccagcggattttacaaagtttatcacaaactgtgtcaacatccagcgtttactggta
caggactctgtgggagaccggggtttgttttacgtaggacggtcctgtaggcagctaaga
gagcttcgtgtctaccctttcaacgatcaaagcaatgttacagagaaggggcttgtagcg
atctccgatggatgccgggaaatgcggaaaatcctctacttctgcaagcagatgactaat
gctgcgatgatccagttcgccaggaactgctctaacatgactcacttccggatggccatg
gtgactgtatacgatccagactgcgacaccaagcagccgctggacgaaggcttcggagca
gtgtgcaagttgtgtaaagaccttcgccgcctgtctctttccgggctcttgaccgacaag
acctttgagtatatcggcacgtatgcgaagaagttggaaactctgtcagtagcctttgcc
ggtgatactgacatgggaatggtgcacgttctggatggatgcccagttctgcgcaagctg
gaggtccgagactgtcccttcggggatgaagctctcttgtctggcatcgataagtacgag
tccatgcgcgctttgtggatgtcctcatgcagagtcactatagatggtgttcagtttctg
gcgtctaagaatcccaatctgaacgtggaagtcatcagagacattgagatgttacaccat
ccagaatacgttgagaaattgtacgtttatcgttcaattgcagagccccggcaggatgcc
ccgcctttcgtatacatctatagttgcacatag
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