Physcomitrium patens (spreading earthmoss): 112275915
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Entry
112275915 CDS
T01041
Name
(RefSeq) uncharacterized protein
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112275915
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112275915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
WD40_like
Beta-prop_IFT122_1st
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
112275915
NCBI-ProteinID:
XP_024362466
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Position
2:complement(2845245..2848662)
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AA seq
498 aa
AA seq
DB search
MYRTKDLYRCGLGEHWRRQIGDVTPTAFSRKIGGCEDLIHRLINYAELEGHNGCVNTVSF
NPSGELLVSGSDDQEIKVWNWGSKTEVLSYESGHEDNVFQARVMPYSDDRIIVSCAADGQ
VRYGTILENGRVSTKNLAKHRNRAHKMAIEPGSPRIFYSCGEDGVVRHFDLREEKSTKLL
TCHQFRASTGKPSRSRVVRLNAIVMNPRNFNYFAVGGSDQYARVYDLRRVNANGFEMEDN
PVQCYAPKHLQGRDHEEHITCVAYSHQEELLVTYNDELIYLFDKSMSLGSGPEQRNSEDD
WKGDDEGEGSQQDVPQPQVYEGHRNHQTVKGVNFLGPNTEYVVSGSDCGRIFIWKKKGGE
LVALIKGDNKVVNCLEPHPYATVLATSGIDETIKVWAPISERILELPQDAERVMKINKRR
RESHASSVPLTAGLVRTLLLQRHLQIPTEGEGGTYTRVSFEGGSFDDEIAAVLDSDFEGD
DDSSDDGGNGNPRECIIS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgtacaaaggacttgtataggtgtggcctcggcgagcattggcgtcgccagatt
ggggatgttactcctactgcattttctcgaaagatcggtggctgtgaggatctcatccac
cgtcttattaattacgcggagttggaaggacacaatgggtgtgtaaatacagtgtctttt
aacccatctggtgagcttctagtgtccggttcagatgaccaggagatcaaagtgtggaat
tggggaagcaaaaccgaggttctatcttatgaatcaggtcacgaagacaacgtgtttcag
gcccgagtgatgccgtactctgatgaccgcatcattgttagctgtgcagctgatggccag
gtgagatatgggaccattcttgaaaacggaagggttagcacaaagaaccttgcaaaacat
aggaaccgtgctcacaagatggcaattgaacctggcagccctcgcattttttacagctgt
ggagaagatggtgttgttcgacattttgacttgcgggaggagaaaagtacaaagctcctc
acttgtcatcaatttcgagcaagcactggcaagccaagtcggtctagagtagtccggctg
aatgcgattgtcatgaacccaagaaacttcaactacttcgctgtagggggttctgatcaa
tatgcacgcgtttatgacttgcggcgagttaatgcgaatgggtttgaaatggaagacaat
cctgttcagtgttatgctccaaaacatctccaagggcgagatcacgaggaacatatcacg
tgtgttgcctactctcaccaagaggaacttctcgttacctacaacgacgagctcatttac
ctgttcgacaaaagcatgagcttgggttctgggccggaacagagaaactcagaagatgat
tggaagggtgacgatgaaggtgagggatctcagcaggacgttccacagccgcaagtatac
gagggtcaccgaaatcaccagactgtgaagggcgtcaactttttgggtcctaacacagaa
tacgtcgtcagtggctcagactgtgggcgaatttttatttggaagaagaaaggcggggag
cttgttgctttgatcaagggagacaataaagtcgtgaattgtcttgagcctcatccttat
gctaccgtgctggccaccagtggtattgacgaaaccatcaaagtctgggctcctatttcg
gagcgcatccttgagcttccgcaggatgctgagagagttatgaagatcaacaaacgaagg
agagagagccatgcatcgagcgttccgctcaccgcaggtcttgtgagaacgctgctcctg
cagcgacatcttcaaataccaactgaaggcgagggtggaacttatactcgcgtttccttc
gaggggggttcttttgatgacgagattgcggccgtgctggacagcgacttcgaaggtgat
gacgactcttccgatgatggagggaatggaaatccacgtgaatgtataattagctga
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