Physcomitrium patens (spreading earthmoss): 112275924
Help
Entry
112275924 CDS
T01041
Name
(RefSeq) uncharacterized protein
KO
K19022
AP-5 complex subunit beta-1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112275924
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
112275924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
Motif
Other DBs
NCBI-GeneID:
112275924
NCBI-ProteinID:
XP_024362467
UniProt:
A0A2K1II68
LinkDB
All DBs
Position
23:complement(4019874..4025512)
Genome browser
AA seq
1219 aa
AA seq
DB search
MAEKGSGKLLGVSDWEQLFQDFKASLDLQQKWLASWPGLTIIDQALQSITKKEYPLKAPL
FNFLEENGSALVGEDDAPAGVAMLVEGLKSVLQAQVDGVAITYGLKEQMMVMVTTVAIDV
DAIHSATVAFETLIEVLLGFINRTNHAVDRHVRATACDCLKELEMAHPCLLSSCVGHVFS
FCQSERTHASQAYKLLLTAILHNMACHMYTGKQSRLVGSNSFLSITTPLVPFSVPSYLAA
SSARQEASSVPTRELSAGSIKEFKRAVAYLLQHLDLLTEFGMLEFVTRFINIAKALELHG
SLLRPTVSSLLYAYNPVIIHVVLVIFTQFIKAFEGEENAIVKRLATLCCESQQPLPIRLL
GLHWLLGLEKQLQLEASIIAPEAPGLYPRMYDPLALQALKLETLAQCAVQLKSATESQLA
SNGSTLGIFKVLGMDVTPTDAASKILNEGLLCLSSFTWLPPSSTETQITFFALHNFLTAA
APHKGSCPDAEIGKFTKSPLFCTIQLILVKMALKILTLIPNILKLVDQLLACEAHHRLGE
HLLRTFNDDLLPQLAPSRNLPAYFPLLERIAENKNIPPARLLELLTMYIRKLVEEDKGDE
GLRLWQRGNQVLGICCKVLMHHQSSRGFHGLVQLLTYMCRFFPDLDGRDTARLYLRMLIS
IPGDPLRRILRYGDKRIEEANASQYNTVSSNPSKQETQAQVAEYVKLTRERTLLVRHSWS
LVLYNTFQTGVDGGYTDLDLGVRVPEVVVEDVSDQPKEASEEVKNKSIHATVSEKDAFIV
QDAESKVKEKKGRPSDAVPRVMDARTSSILAVLRQHFEEIPDYRNGFGVKISVRCELRFL
GEVLMGLLAESYGGSDPSNVSESWPAIYAVVISFSSTGLYGPIHSVHVPFLLSEPPQNRS
WRTPGTESPTSVITEADPNFSIEKSNAKSKTFPEDSDDDRGQQFLLLEGSKEDDEVTYSE
TIVVELEPKQPVPTLVDAKIVFSNEDGHTVQGQLDSIPVGIEDLFQKPLLPEDLAHCDQP
EYLFSLFKALFEACSGPGRLGTETFLLKNAESKAGVSIEGSESVKLLEGQADRIVGAVEQ
WLGPFVVAVSGSALVSMVKDGGMLTHPVFLEDDFSFHPRGDAGRSSHGWPGDGAILRLED
SKNKAEQGSVNPNARPMGLEVGSKGGLGCFYVLIFLPPRYHLLLRMEVSDWSTLVRIRTD
HWPCLAHVDEFLEALVMSR
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaggggagcgggaagctccttggagtgtcggattgggagcagttgtttcag
gattttaaggcgtcgctcgatttgcagcagaagtggttggcgtcgtggcctggtctgacg
attatcgaccaagcgctacaaagtatcacgaagaaggagtatccactgaaggcgccatta
ttcaatttcctggaggagaatgggagtgcattggtgggcgaggacgatgctcctgcggga
gttgcaatgttggtagaggggctaaagagtgtgttgcaggcgcaggtggacggagtggcg
atcacttatggattgaaggagcagatgatggtgatggtgaccacagttgccattgacgtg
gatgcgattcattctgctaccgtggcttttgaaaccctcatcgaggtcctgcttggattt
atcaaccggacgaatcatgccgtcgaccggcatgttcgcgctacggcgtgcgactgtttg
aaggaactcgagatggcgcacccatgcttgctgagttcgtgtgttgggcatgtgttttcg
ttttgccagagtgagcggacgcatgccagccaagcctacaagttgctgctcactgctata
ttgcacaacatggcgtgtcacatgtacactgggaagcagtcgaggttggtggggtcgaac
tctttcttatcaatcactacccctttggtcccgttttcggttccttcgtatctggctgca
tccagcgctcgccaagaagcatcttccgtgcccacaagagaactgtccgcaggcagcatc
aaagagttcaaacgtgcggttgcttatctgctccaacatttggatctattgacagaattc
ggaatgttggaatttgtgaccaggttcattaatattgcaaaagcacttgagcttcacggt
tctcttttgagacccacagtgtctagtctcttatatgcctacaacccagttataatccac
gtggtactcgtaatatttacgcagtttattaaggcattcgaaggggaagagaatgcgatt
gtgaagcgcctggctactctctgttgtgaaagccaacagcctcttcccattcggttactt
ggtctgcattggctgttggggttagaaaagcagcttcaattagaagcttctatcattgcg
cccgaggctccgggtctctacccccgcatgtacgaccctcttgctttacaagcattgaag
ctcgagactttggcacagtgtgcagttcagctcaagtctgcaactgaatcacaattggca
agtaacggttctacattggggatctttaaggtcttagggatggacgtgacgccaacagat
gctgcgagtaaaatcctgaacgaaggtttgctttgtttgtcgtctttcacatggctgcct
ccttctagcacagagacacagataactttctttgccttgcacaatttcctcaccgctgct
gctccacataaaggatcatgtccagatgcagagattggcaaattcaccaagtcaccctta
ttctgtaccatacagctgatccttgtgaaaatggctttaaaaatcctcactcttatcccc
aatattcttaagcttgtggaccagcttctggcttgtgaagcgcatcacagattaggtgag
catcttttgcgcaccttcaatgatgacttgcttccccagttggccccaagccgcaatttg
cccgcttattttccccttctagagcggattgctgagaataaaaacattcctccggcccgg
ctgctggagctccttaccatgtatataagaaagcttgtcgaagaagacaagggagatgaa
ggcttgcgactctggcaacgaggtaaccaggttcttggaatctgctgcaaggtattgatg
caccaccaaagctcacgaggattccatggactcgtccaattgctcacatatatgtgtagg
ttcttcccagatctggatgggcgtgacaccgccagattgtacttgagaatgctcattagc
attccgggagatcctcttcgtaggattttgcggtatggagacaagcgaatcgaagaagct
aacgcttcacaatataacaccgtttcttctaatcctagcaagcaggagactcaggcccaa
gttgctgagtatgttaaacttacaagagaaagaacactactggttcgtcactcatggtct
ttagttctctacaacacgtttcagactggtgttgatggaggatatacagatttagacctg
ggggtccgggttcctgaagtagttgtcgaggatgttagtgatcaacccaaggaggcaagt
gaagaagtgaaaaataagagcatccatgcaactgtcagtgagaaggacgctttcattgtt
caagacgcagaaagtaaagtcaaggagaaaaaaggaagaccatctgacgcagttccacgt
gtaatggatgcaaggacctctagtattttagctgtactacggcaacattttgaggagatt
ccagactaccggaatggttttggggtaaagatcagcgttcggtgtgaattaaggtttctg
ggtgaagtactgatgggcttactggcagaatcgtatggtggatcagatcccagcaatgtg
tctgaatcctggcccgcaatatacgcagttgtaatctctttcagttctaccgggctatat
ggacccattcattctgtacacgttccctttctcctcagcgaaccaccccagaatagatcc
tggcgaactccagggacagaaagtcctacatcagtcattacagaagctgatccaaatttt
agcatcgagaagtccaatgctaagagtaaaacttttcccgaggattctgatgatgaccgt
ggtcagcagtttcttctgcttgagggatcgaaagaggatgacgaagtcacttatagcgag
actattgtcgtggaattagagcccaagcagccagttcccacccttgtggacgcaaaaatc
gtcttctctaatgaagatgggcacaccgtacaaggccagcttgattcaattccagtgggg
atcgaagatctattccagaagcccctgctccccgaagacctcgctcactgtgaccagccc
gagtatcttttttctcttttcaaagctctgttcgaggcctgcagtggccctggccgcttg
ggtactgagacgtttctcttgaaaaatgctgagtcgaaagctggggtttcaatcgaaggc
tcggagagtgtgaagcttctggaagggcaggcagatcgcattgtgggcgcagttgagcaa
tggcttggcccctttgtagttgctgtgagcggtagcgcactggttagcatggttaaagat
gggggtatgttaactcatcctgtgtttttggaggacgacttttcattccaccctcgagga
gacgccggaagaagctcacatgggtggccgggcgatggcgccatccttagattagaagat
tccaagaacaaagcagagcaaggctctgtcaatcccaacgcacggccaatgggccttgaa
gttggcagtaagggtgggttagggtgtttttacgtgcttatcttcctgcccccacgatac
catttgctccttcgaatggaagtatctgactggtctacgctggtacgtatccgcactgac
cactggccatgtcttgcccatgtggacgagttcctcgaagctctggtcatgtcaaggtag
DBGET
integrated database retrieval system
