Physcomitrium patens (spreading earthmoss): 112275933
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Entry
112275933 CDS
T01041
Name
(RefSeq) diaminopimelate decarboxylase 1, chloroplastic
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00300
Lysine biosynthesis
ppp00470
D-Amino acid metabolism
ppp01100
Metabolic pathways
ppp01110
Biosynthesis of secondary metabolites
ppp01230
Biosynthesis of amino acids
Module
ppp_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
112275933
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
112275933
Enzymes [BR:
ppp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
112275933
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
112275933
NCBI-ProteinID:
XP_024362491
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All DBs
Position
23:10968204..10969922
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AA seq
515 aa
AA seq
DB search
MAAQAMHATQMRAAVVPSLSNVQCPTRTSSAACLLRSSGSLRVENAGHQLRISSKQSSKQ
GKAAAARGCRAAVSDFAAVQQQEAKQVASQISAFSVREDGYMYCEDVRVQDIMDNEVEEV
RPFYLYSKRQLRRNYEAYQEALKGLNSIIGYAVKANNNLKIMRCLRELGSGAVLVSGTEL
RLAVEHTGFDPARCVFNGNGKLLEELELAAQYGVLINVDSEFDLAQIIEASRNTGKRIKV
LLRINPDVDPQVHPYVATGNKNSKFGIRNEKLGWFLEEVKKHSENLELVGVHCHLGSTIT
KVDVFRDAAVVMVDFVKKIRGENFTIKYLNIGGGLGIDYYHKGAILPTPTDLIDTVRDLV
TKEGLTLIIEPGRSLVANTSAFVSHVTGVKTNGTKDFIVIDGSMSELIRPSLYGAYQHIE
FVAPPAEGAEVKTFDVVGPVCESADFLGKERELPTPKRGDGIVVHDAGAYCMAMASTYNL
RMRPPEYWVADDGKTVEKIRHAEQLDDHIRYFEGL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaagccatgcacgcgacgcagatgcgagctgccgttgtgccgtctttgagc
aatgtgcagtgcccgacgagaacctccagtgctgcctgtcttttgaggtcctcaggaagc
ttgcgcgtggagaatgccgggcatcagctgaggattagttctaagcagagcagcaagcag
gggaaggcggcggcggctcggggttgcagagcggcggtgtcggacttcgctgcggtgcag
cagcaggaagccaagcaggtagcatcgcagatttctgccttttctgtccgagaggatggc
tacatgtactgcgaggacgtgcgggtgcaggacatcatggacaacgaggtcgaggaggtg
cggccgttctatttgtacagcaagaggcagctgcggaggaactacgaggcttaccaggag
gcgttgaagggattgaactccattattggatacgccgtgaaagccaacaacaatttgaaa
atcatgcggtgcttgcgggagctcggaagcggtgctgtgctcgtgagtggcaccgagttg
cgtcttgcggtggagcataccggcttcgatcccgccaggtgtgttttcaatgggaatggg
aagctcttggaggagttggaactcgcggctcagtatggtgtgcttatcaacgtggatagt
gaattcgacctggcacaaattatcgaggccagtaggaacactggaaaaagaattaaggtg
ttgctgcgcatcaatcctgacgttgatccccaggtgcatccgtacgttgcaaccggtaac
aagaattcgaaatttggaattcgcaatgagaagttggggtggtttctggaggaagtgaag
aagcactctgagaatcttgagttagtgggagtgcattgtcatcttgggtcaaccattacg
aaggttgatgtgtttcgagatgcagcagttgtgatggttgattttgtgaaaaaaattcgt
ggcgagaacttcacaattaagtacttgaatattggaggtggccttggcattgactactac
cacaaaggcgccatcctacccactccgacggatctcattgacacagttcgtgacctggtg
acaaaagaaggtttaacgcttatcattgagcctgggaggtctctagttgccaacacctcg
gcgttcgtgagccatgtgactggtgtgaagacgaatggaacgaaggactttattgtcatt
gatggaagcatgtcagagctgatcaggcctagtctgtacggtgcctatcaacatatagaa
tttgtcgctccccccgctgagggcgcagaagtgaagacttttgatgtcgtcgggcctgtt
tgtgaatctgcggacttcttgggcaaggagcgtgaattacctacaccgaaacgtggagat
gggatcgtcgtgcatgatgcaggtgcatactgtatggcaatggcttcaacatataacttg
aggatgagacctcctgaatactgggtggcagacgatggtaagactgtagagaagattagg
cacgctgagcaattggatgaccacatccgctattttgaaggcctgtga
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