Physcomitrium patens (spreading earthmoss): 112275975
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Entry
112275975 CDS
T01041
Name
(RefSeq) DNA mismatch repair protein MSH3
KO
K08736
DNA mismatch repair protein MSH3
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
112275975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112275975
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
112275975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
112275975
NCBI-ProteinID:
XP_024362627
UniProt:
A0A2K1L1R5
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Position
2:complement(10964794..10973490)
Genome browser
AA seq
1309 aa
AA seq
DB search
MKRQQVISRFFTPKSVAASPATPSPTASTSTASKPAGAKQSSSGSGTRPLVRIPPASLEP
AGPVGGTLPSSRNLSQDFPFSSTGVRSTKKRSHNEVGSIEKDHCGTEGSQEERTLTSVSG
SDGSLRAGPLRKKRAITKAVTPIVAPNVAEVEAPDIPISDQEVLDYPEKDDEISELQLQR
EALRGGVPQSITPDTENGSASGSGIEEPVPSSPHQPIGIHKKRGWAANSATVIPAVDPDR
HRKFVDKLLARNNERITEEEIRYGKPPSGKLTYTPLELQVLELKERYPDVLLMIEVGYKF
RFFGNDAETAARVLGIFAYYNHNFLSASIPTFRLHVHVRRLVEAGYKVGVVRQTETAAIK
AHGTNKSGPFTRGLSALYTRATLEAAEDLGGDTEDHVGRLHSYLMCIAEDPILQGLGSSK
SKPANSKSKSAEVDDDKGGYYDARLGVVAVDPATGDVMFGDFKDSVMRNELEALLLTCAP
AELLLATPLSAATEKLVIEHAGPASDVRIERISRDCFRDGGALAEVIAFYKSKGEDDAAD
SVEDEKVDPGLEAVMAMPDIVMQSLALALRYLRQFGMEKVLKLGASFRRFAGHSEMSLSP
NALRQLEILRNNADGTNKGTLLWLMDHTHTLFGARLMRHWVTHPLQDEGLIAARLDAVTE
IAESMGSVGVAQGHGSFPGSGRGGGNVGSLSRDAAGEGGKNSKQGLLVSLLMSLGKLPDV
ERGITRIFLRTATAAEFVSVVQGLIKASRQLRQLHFDHKDSDMELDDVHPKSVKSSLMRR
LVAAASSVSVSEPAAQLLSSLDTDAAASGDKLKLFHCRDGKFPEVKNCRLAIEAIEQQLE
DLLPNIRKVLKSPRLEYMSVSGTTHLIQMPVAHRVPANWIKVNSTKAMHRYHPPEVLEAL
DALTLAKEELSIACGRAWDAFLAEFASHYVAFRAAVQALAALDCLHSLAIVSRNQGYVRP
EFVGKCDPSQLLITAGRHPVLDATLQDGFVPNDTYLQADKERCQIITGPNMGGKSCYIRQ
VALITIMAQVGSYVPATSAKLHVCDAVFTRMGASDSIQKGSSTFFEELSETSSILRRATS
RSLVIIDELGRGTSTHDGVAIAYATLHHLLKEIRCLTFFVTHYPRIADLKDEFPGNVSPY
YVSYLAEGQINKQLPEAQIPPVQSEGNSRELRYAEEATQKITFLYKLVPGVASRSFGLHV
ARLAQLPEVCVLQAAAKAAKLEEEVNSRTAAASASCSEPESHLMDVEGTTKLSEVAAERS
LTGLSLDDLTKLLSMVEMACSHQDEVSAFSCVKEAQAQARAVLSLHQHP
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcaacaagtcatctcgcgcttctttacacccaaatctgttgctgcttcccct
gccactccctctcccactgcatcgacctccactgcctctaaaccagcaggtgcgaagcag
agctccagcggttctggaactcgaccgcttgtgcgcattccgccggcctctttggaacct
gctggacccgtgggtggaacactaccatcttcaagaaatcttagtcaggattttccattt
tcgtctaccggagtgagatctacgaaaaaaagatcacacaatgaggttggtagtattgag
aaggaccattgtggcacagagggcagtcaggaggagaggactcttacttcagtcagtgga
agtgatggcagtttaagagctggtcctctgcgcaagaagcgagcgatcacaaaagctgtg
acacctattgtggctcctaatgtggcagaagtcgaggcacctgacattcctatatcggat
caggaagtcttagactaccccgagaaagatgatgagatttctgaattgcaacttcagaga
gaagctctgcgtggcggagtacctcaatctatcactccagatactgagaatggatctgct
agcggaagtggcattgaggaacctgttccctcgtctcctcatcaacctattgggatccat
aaaaagaggggttgggctgcgaacagtgcaacagtaatcccagctgttgatcctgatcgt
cacagaaaatttgtggacaaattgttggcacgaaataatgagaggataacagaggaggag
attcggtatgggaagccaccttcaggcaaattgacatatactcctcttgagcttcaagtt
ttggaactgaaggaaaggtatcctgatgtactgcttatgattgaagtagggtacaaattc
agattctttggaaacgatgcagaaactgctgctcgtgtacttggcatctttgcgtactac
aatcacaattttctgtctgcaagtataccaacgtttagactccacgttcatgttcgaaga
ttggtggaagctgggtacaaggttggagttgtgcgacagacagaaacagctgccattaag
gcccatggtacaaacaaatcaggaccttttacccgtggcctgtcagctctgtacacccgc
gcaacccttgaggctgctgaggacctaggaggtgatacagaggatcatgtaggtcgtctg
cacagctaccttatgtgtattgcggaagatcccatattacaaggtcttggcagtagcaag
agtaagccggcaaattcaaagagtaaatctgctgaagttgacgatgataaaggtggctac
tatgacgcacgattaggggtcgtggcagtagatcctgcaacaggggatgtgatgtttgga
gatttcaaggacagtgtcatgcgtaacgaactcgaagcactgttgctcacatgcgcgcct
gcggagttgctgttggcaactccactttccgcagcaactgaaaagcttgtcatagaacat
gcagggcctgcctcagatgtccgcatagagcgaatatctcgtgattgtttcagagatgga
ggggctcttgcagaagtgatagctttttacaaatctaagggcgaagatgatgctgcagat
tctgtcgaagatgagaaagtagatccaggtttggaggctgtaatggccatgccagatatt
gtcatgcaatcattagctctggcattgcgctatctcaggcaatttgggatggagaaagtg
cttaaactgggagcatcctttcgccgttttgcaggccatagcgagatgagcctttcgcca
aacgctcttcggcagctagagattctgaggaataatgcagatggaaccaataaaggcact
ctgctttggctcatggaccacacgcacactcttttcggtgctcgcttgatgcgccattgg
gtgacgcatcctcttcaggatgaaggattgattgctgcgcggttggatgcagtgacggaa
atagcggaatctatggggagtgtgggagttgcccaaggacacggaagttttcctggaagt
ggaaggggtgggggtaatgttgggtcattgagtcgcgatgctgctggcgaaggagggaag
aatagcaaacaaggtttgctggtgtcactgctgatgtcactgggcaaattgcctgatgtg
gagcggggaattactagaatcttccttcgcacggctacagctgctgagtttgtttcagtg
gtacaagggctaataaaagcgtcaagacagctccgtcagctgcactttgaccacaaagat
tcagatatggagttagatgatgtacacccaaagagtgtgaaatctagtcttatgagacgt
ctagtggcagctgcttcatcagtttctgtatctgagcccgcagctcaactcttatcttcc
ctcgacactgatgcagcagcttctggtgacaaactcaagctcttccattgcagagatgga
aaatttcctgaggttaaaaattgccgacttgcaatcgaggcaatagagcaacaacttgag
gaccttcttcctaatattcgaaaggtgctcaagtcacccaggcttgaatacatgagtgtg
tccggaacaacacatttaattcagatgcctgttgcacatcgagtgccagcaaattggatc
aaagtaaacagtactaaagcaatgcacagatatcaccctccggaggtattggaggcattg
gatgcccttactcttgcaaaagaggagcttagtatcgcatgtgggcgtgcctgggatgct
tttttggcagagtttgcttcacattatgtggcttttcgggcagctgttcaagctcttgct
gctcttgactgtctccactcacttgccattgtgtctcgaaaccagggctatgtgcgtcca
gagtttgtaggaaagtgcgacccttctcagctgttgatcacagctggacgacatcctgtt
cttgatgcgacgttgcaagatggttttgtgcctaacgacacttatttacaagcagacaag
gaacggtgtcaaatcatcactgggccaaacatgggtggtaaaagttgctacatccgtcaa
gttgccctgattaccatcatggctcaggttggttcatacgtccctgcaacatcagctaaa
ttgcatgtgtgtgatgcggtcttcacaagaatgggggcatctgacagcattcaaaagggg
tctagcacattttttgaggaactcagtgaaacttcttcaatcttgaggcgtgccacttca
agatctcttgttatcattgacgagcttggccgtggcaccagcactcatgatggcgttgca
atcgcttacgccactcttcatcatcttctgaaggaaataagatgccttactttctttgtg
acgcattacccaaggatagctgatctcaaagatgagttcccaggcaatgttagcccgtac
tacgtctcatatttggcagagggtcaaataaataagcaattgccggaagcacaaatcccg
cccgtccagagtgagggcaacagtcgagagttacgttatgcagaagaggcaactcagaaa
attacttttctgtacaaacttgtgccaggagttgcaagcagaagttttgggctgcatgtt
gctcgtctcgcacagctgcctgaggtatgcgtcctgcaagcagcagcgaaagctgctaag
ctagaagaggaggtgaactcaaggactgcagcagcaagtgcatcctgttcagaacccgag
tcccatttaatggatgtggaggggaccacaaagttgtcggaagtggcggctgagagaagc
cttactggactctctctggatgacttgactaaactactgtccatggttgaaatggcttgt
agtcaccaggatgaggtctctgctttttcttgtgtgaaagaagctcaagcccaagccagg
gcagttttgagtctgcatcaacatccttag
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